Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2711 ATGGCTTATGCCAATTCAGACATAAGAGGAGGAGGCAGTGGCTGCGCCATGTGGTTCGGCGATCTAATTGACATCAAACTGTTTCAAAATGGTGGACAAGATCTATACATCCGAATGCCTGCTTTTGAGTCAGGACTTCAACATCGGCACAAGCAAAAAGTGATCATTGCTAGCACCATTGTTGCATTTTGTGCAACACTTCTACTTTGTGTTTATGTTATATACAGAGTCCGAAGGAACAATATTGAAAAATCAAATATAGAAGAATATGTAAATGATACAGATCTACCATTATTTGATCTACTAACAATTACTACTGCCACGCACAAGTTCTCGTTGAATAACAAGATTGGACAAGGCGGTTTTGGACCTGTTTATAAGGGAAAATTAGAAGATGGACTTGAAGTTGCTGTGAAGAGACTCTCACATAGCTCTACACAAGGAATGACTGAATTCATAACTGAAGTAAAGCTAATAGCGAAACTTCAGCACCGTAATCTAGTAAAACTTCTTGGTTGTTGCATTCAAGGAGAAGAAATTTTGTTAGTTTATGAATATGTGGTTAATGGGAGCCTAGACACCTTCATCTTTGATAAAACAAAAAGCAAGATGTTGGATTGGTCTCAGCGCTTGGGCATAATATTTGGAATTACTAGGGGACTCTTGTATCTTCATCAAGATTCAAGATTGAGAATTATTCATAGAGATCTTAAAGCAAGTAATGTTTTACTTGATGACAAATTAAACCCAAAAATATCAGATTTTGGAATGGCCAGGACTTTTGGAGGAGATCAAACCGAAGGAAACACAAATAGAGTCGTGGGGACTTATGGATACATGGCTCCAGAATATGCTATCGACGGTTTGTATTCTATAAAATCCGATGTCTTCAGCTTTGGCATACTTATGATGGAAATTATATGTGGGACTAAAAACAGAGCTCTTTGTCATGCAAATGAAACTCTCAACCTCATTGGCTATGCTTGGAGGCTATGGAAAGAGGACAAAGCTTTAGAGTTGATAGATTCAAGCATAAAGGAGTCATGTGTAATCTCAGAAGTAATGCGTTGCATCCATGTGAGTCTGTTGTGTGTGCAACAATACCCTGAGGATAGGCCTACAATGGCTTCTGTGCTTCTCATGTTAGCAAGTGAGATGGATTTAGATGAGCCTAAAGAGCCTGGCTTCTTTCCCAAGTGGGTCTCTATGGAAGCGAATTCGCAGCCACATCAATGTGAACTATCTTATGATGAATTAACCGTTACTTCATTAGATGGCCGGTGA 1284 0.3894 MAYANSDIRGGGSGCAMWFGDLIDIKLFQNGGQDLYIRMPAFESGLQHRHKQKVIIASTIVAFCATLLLCVYVIYRVRRNNIEKSNIEEYVNDTDLPLFDLLTITTATHKFSLNNKIGQGGFGPVYKGKLEDGLEVAVKRLSHSSTQGMTEFITEVKLIAKLQHRNLVKLLGCCIQGEEILLVYEYVVNGSLDTFIFDKTKSKMLDWSQRLGIIFGITRGLLYLHQDSRLRIIHRDLKASNVLLDDKLNPKISDFGMARTFGGDQTEGNTNRVVGTYGYMAPEYAIDGLYSIKSDVFSFGILMMEIICGTKNRALCHANETLNLIGYAWRLWKEDKALELIDSSIKESCVISEVMRCIHVSLLCVQQYPEDRPTMASVLLMLASEMDLDEPKEPGFFPKWVSMEANSQPHQCELSYDELTVTSLDGR* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2711 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Ahy18g2711 427 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 426 - -
Ahy18g2711 427 Gene3D Transferase(Phosphotransferase) domain 1 187 393 - -
Ahy18g2711 427 ProSiteProfiles Protein kinase domain profile. 111 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g2711 427 CDD STKc_IRAK 117 382 - -
Ahy18g2711 427 Pfam Protein tyrosine and serine/threonine kinase 112 379 IPR001245 GO:0004672|GO:0006468
Ahy18g2711 427 Gene3D Phosphorylase Kinase; domain 1 72 186 - -
Ahy18g2711 427 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 426 - -
Ahy18g2711 427 SMART serkin_6 111 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g2711 427 SUPERFAMILY Protein kinase-like (PK-like) 96 410 IPR011009 -
Ahy18g2711 427 Pfam PAN-like domain 2 25 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2711 Ahy-Chr18 130438400 130440426 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2711 54 399 Receptor kinase-like Gene Family AT4G23190 53.824 2.71e-131 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy18g2711 PK_Tyr_Ser-Thr 3.50E-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2711 - - ahf:114925812 863.218