Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2684 ATGAAAATGCAGCAGCATCTGCTACATGGGACGCTTAGGGTAACAATATATGAAGCTGATAAGTTGCAAACGGGATGTAATTTGGATTTCTGTGCCAAGGGCACAACACACAAGGGGAAGAGATTCCTAGCCCAAGTCAAAGGATGTCTGCTGTGCAGGCCTGAGATTGTTGGAAGGAGACTATACGCAACAGTTGATCTAGACAAAGCAAGAGTTGGAAGAACAAGAATGATAGGAAACCAACCTTCACACCCTAAATGGAATGAAACATTTCAAATTTACTGCGCTCACACCATCTCTCAAATTGTCTTCACCGTCAAAGATGGCAATCCAATCGGCGCAACTCTCATCGGAAGAGCCTTCATTCACTCCAAAGAACTCCTTCAAGGCCACATTGTTAGCCGATGGCTCGAGATTCTCGACGACCAAGACCGTCTCCCAGTTCACGGCGCTCGAATTCATGTAAGCGTTCAATTCTTCCCTGTAACTGACTACTCCACCGGGATAACGCCGTCGTTTAACGGCGTTCCTAGAACATTCTTCAACATGAGAAAAGGTTGTAAGGTTACACTATACCAAGACGCTCACGTTCTTCGTGGCGCACTACCTTGGATTCCGTTAACCGTAGGGAGATACTATGATGAGCCTCCACGGTGTTGGGAAGATATTTACAATGCTATCAGGAATGCGAATCATTTGATTTACATAACCGGTTGGTCGGTTTATACCGAGATAACGTTGGTTAGGGACAAAACGACAGGACCTAGTGTCGTTACGCTTGGGGAGCTTCTTAAGGACAAAGCGGATGAGGGTGTTCGAGTTCTTATGCTTGTTTGGGACGATAGATCTTCCGTGCCGCAGTTTAAGAAAGATGGGTTAATGGGAACCCATGATCAAGAAACAGAACAGTATTTTAGGAATACTAAGGTGAAATGTTTTCTTTGTCCGCGAAATCCTGATGATGGAAGAACCATTGTTCAGGGGATTCAGACCTCAGCAATGTTCACCCATCATCAGAAAAGCGTGGTTGTTGATGGTAATGTCGAAGGGAATACTAAAAGAGGGATCGTAAGTTTTATTGGCGGGATTGATCTTTGTGATGGAAGATATGATACTCAAGATCACCCTTTGTTTTCGAGTCTAAATACTGTCCACCGTGATGACTTCCATCAACCGAATTTCCCCGGCGCTTCGATCAAGAAAGGCGGCCCGAGGGAGCCGTGGCATGACGTGCATTGCAAGTTAGAAGGACCGGTTGCTTGGGATGTGTTGTACAATTTTGAACAGAGGTGGGAGAAGCAAGTTGGGAAGAATCAAAACCTGTTATTCACACTTGATGAGCTTGATCAAATTGTTGTGCATCCAAGTGAGGCTGCTGCTACATTGGAAGAAGACAGGGATTGTTGGAATGTTCAGTTGTTTAGGTCGATCGATGGCGGCGCAGTTTATGGATTCCCACAAAACCCTGAAGAAGTTGCTGAATTAGGCCTTGTTAGTGGGAAAGACAATGTGATAGATAGAAGCATTCAAGATGCATACATTCATGCGATTCGGCGTGCCAAGGATTTCATCTACATTGAGAATCAGTACTTCCTAGGGAGTTCATATGGTTGGAAATCATCTGATATACGAGTTGAGGATATTAATGCCTTGCATCTTATACCAAAGGAGCTTTCACTCAAGATTTGTAACAGCATTGAAGCAGGACAAAGGTTTGTTGTGTATGTTGTGATTCCGATGTGGCCGGAAGGTGTGCCTGAAAGTGCTTCAGTTCAGGCAATTTTGGACTGGCAGAGAAGGACTATGGAGATGATGTATAGTGACATTGCTGAGTCCATAGAGAAGAAGGGGATTGAAGCACATCCTAGGGATTATTTGACATTTTTTTGCCTTGGGAAGAGGGAGCCTAAGATGGAAGGTGAATATGTTCCTACACAACAACCTGAACCTGATAGTGACTATATAAGAGCGCAGAATGCTAGGAGGTTCATGATCTATGTTCATTCCAAGATGATGATAGTGGATGATGAATACATAATAATTGGTTCAGCCAACATAAACCAAAGATCAATGGATGGGGGAAGAGACACAGAGATAGCAATGGGAGCATTCCAACCACACCAAAGAGTGCCACGTGGCACCAAACCAGAGGGCCACGTGCATGCATTCAGAAGAGCCCTATGGTACGAACACCTAGGGGACCCACTTGCACTGGACGAGGTTTTCAACCGACCAGAGAGTGAGGAGTGTGTGAAGCTTGTGAACCATCTTGCTAAGAAGAATTGGGATTTGTACACTCAAGATGAGTTTGATGTTAACACACCACTTCATCACTTGTTGCAGTACCCTGTACACGTGGCAAGTGATGGTACCATAACAACGTTGCCTGGCTTTGAATGTTTTCCGGATACTAAGGCCCATGTTCTTGGATCAAAATCTGAGTACCTTCCTCCAATACTCACCACCTAG 2469 0.4471 MKMQQHLLHGTLRVTIYEADKLQTGCNLDFCAKGTTHKGKRFLAQVKGCLLCRPEIVGRRLYATVDLDKARVGRTRMIGNQPSHPKWNETFQIYCAHTISQIVFTVKDGNPIGATLIGRAFIHSKELLQGHIVSRWLEILDDQDRLPVHGARIHVSVQFFPVTDYSTGITPSFNGVPRTFFNMRKGCKVTLYQDAHVLRGALPWIPLTVGRYYDEPPRCWEDIYNAIRNANHLIYITGWSVYTEITLVRDKTTGPSVVTLGELLKDKADEGVRVLMLVWDDRSSVPQFKKDGLMGTHDQETEQYFRNTKVKCFLCPRNPDDGRTIVQGIQTSAMFTHHQKSVVVDGNVEGNTKRGIVSFIGGIDLCDGRYDTQDHPLFSSLNTVHRDDFHQPNFPGASIKKGGPREPWHDVHCKLEGPVAWDVLYNFEQRWEKQVGKNQNLLFTLDELDQIVVHPSEAAATLEEDRDCWNVQLFRSIDGGAVYGFPQNPEEVAELGLVSGKDNVIDRSIQDAYIHAIRRAKDFIYIENQYFLGSSYGWKSSDIRVEDINALHLIPKELSLKICNSIEAGQRFVVYVVIPMWPEGVPESASVQAILDWQRRTMEMMYSDIAESIEKKGIEAHPRDYLTFFCLGKREPKMEGEYVPTQQPEPDSDYIRAQNARRFMIYVHSKMMIVDDEYIIIGSANINQRSMDGGRDTEIAMGAFQPHQRVPRGTKPEGHVHAFRRALWYEHLGDPLALDEVFNRPESEECVKLVNHLAKKNWDLYTQDEFDVNTPLHHLLQYPVHVASDGTITTLPGFECFPDTKAHVLGSKSEYLPPILTT* 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2684 822 PANTHER PHOSPHOLIPASE D 5 822 IPR015679 -
Ahy18g2684 822 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 663 690 IPR001736 GO:0003824
Ahy18g2684 822 SMART C2_3c 11 136 IPR000008 -
Ahy18g2684 822 SUPERFAMILY Phospholipase D/nuclease 509 740 - -
Ahy18g2684 822 Gene3D Endonuclease Chain A 483 706 - -
Ahy18g2684 822 SUPERFAMILY Phospholipase D/nuclease 171 444 - -
Ahy18g2684 822 Gene3D Endonuclease Chain A 208 463 - -
Ahy18g2684 822 PANTHER PHOSPHOLIPASE D ALPHA 3 5 822 - -
Ahy18g2684 822 Pfam Phospholipase D C terminal 739 812 IPR024632 -
Ahy18g2684 822 ProSiteProfiles C2 domain profile. 1 137 IPR000008 -
Ahy18g2684 822 Pfam Phospholipase D Active site motif 664 690 IPR001736 GO:0003824
Ahy18g2684 822 Pfam Phospholipase D Active site motif 334 369 IPR001736 GO:0003824
Ahy18g2684 822 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 333 369 IPR001736 GO:0003824
Ahy18g2684 822 CDD C2_plant_PLD 7 160 - -
Ahy18g2684 822 PIRSF PLD_plant 1 822 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Ahy18g2684 822 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 162 IPR035892 -
Ahy18g2684 822 CDD PLDc_pPLD_like_1 210 383 - -
Ahy18g2684 822 Gene3D C2 domain 7 170 IPR035892 -
Ahy18g2684 822 Pfam C2 domain 10 138 IPR000008 -
Ahy18g2684 822 SMART pld_4 333 369 IPR001736 GO:0003824
Ahy18g2684 822 SMART pld_4 663 690 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2684 Ahy-Chr18 129958800 129964964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2684 3 822 Phospholipase D Gene Family (Wang group) AT3G15730 62.710 0.0 1043
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2684 K01115 - gmx:100794115 1204.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2684 18 129958800 129964964 Ahy8g2434 8 47045496 47052935 hybridization