Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2673 ATGACGGTGACTCCATTAACGACCGTGTTTCGATGCTTATTATCGAGTCCTGCTCTTTCTTCTCACTCTCACAATCTTCCACTCACTCTCCCCTTCGACCGCACCCCACTCTTCCGCTCTCTCCTCCTCCCCTCCCGCCGCCGCACACTCTGCCCCGCTCTTGCCGCCGCCAACAACAAGAACAAGAGCAACAAAAACAAGAAAAAGTTGTTACGTGATCATGGTACAAAGGGTAGTGATGAGGATGAGGAGGAGGATGCTTTTGAGTTGCTGTTCAAGCAACTTAAAGAGGATCTCAAAAAGGATAATTTGTTGAAAGGTGGTAGCAATGATGATGATGACGATGAGATAACTGAAGAGGAACTTGCCTTGTTAGAACGTGAGTTGGAAGGTGCATTGGGGGAATTTGATGCCGAAACGTTAAATCCAGATGTAATTCATGCTGAAACTGATGCTAGTGATAGTGAAGAAGAACAAGAAGAAGAAGAAGATGATGAAGAAGACGGTGTGCCTATGCTTAGAACTTGGCAGATGAAGAAATTGGCTAGGGCTTTGAAAGCTGGCCGCAGAAAAACAAGTATAAAAAATCTTGCTGCTGAGCTTTGTCTTGATAGGGCGTTTGTTATTGAATTGCTCCGCAACCCTCCTCTGAATCTTTTGATGATGAGTTTATCAATATCTGATGAACCTACACCAAAAGAAATATCCGTTGAGACTAAACCTAGAGAGATTGTTCTCGAAGAAACAAGAACAGATCCTGTGGAAGCTGGAAACAAGGCTAACGTACCAGTTCATGTCATGCAACAAAAATGGTCTGCGCAAAAGAGATTGAAAAGGGCCCAAGTTGACACACTTGAAAAAGTTTATAGGAGATCAAAGCGACCCACTAATGCAATGATAAGTAGTATAGTGCATGTAACCAATATTCCTCGGAGAAGAGTTGTTAAGTGGTTTGAAGACAAACGTGCTGAGGAGGGTGTTCCAGAGAATCGTGTTCCTTACCAGCGCTCTGTATCAGAAGCTAGTTGA 1029 0.4373 MTVTPLTTVFRCLLSSPALSSHSHNLPLTLPFDRTPLFRSLLLPSRRRTLCPALAAANNKNKSNKNKKKLLRDHGTKGSDEDEEEDAFELLFKQLKEDLKKDNLLKGGSNDDDDDEITEEELALLERELEGALGEFDAETLNPDVIHAETDASDSEEEQEEEEDDEEDGVPMLRTWQMKKLARALKAGRRKTSIKNLAAELCLDRAFVIELLRNPPLNLLMMSLSISDEPTPKEISVETKPREIVLEETRTDPVEAGNKANVPVHVMQQKWSAQKRLKRAQVDTLEKVYRRSKRPTNAMISSIVHVTNIPRRRVVKWFEDKRAEEGVPENRVPYQRSVSEAS* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2673 342 Gene3D - 273 330 - -
Ahy18g2673 342 Pfam Homeodomain 276 324 IPR001356 GO:0003677
Ahy18g2673 342 SUPERFAMILY Homeodomain-like 271 334 IPR009057 -
Ahy18g2673 342 MobiDBLite consensus disorder prediction 56 84 - -
Ahy18g2673 342 MobiDBLite consensus disorder prediction 151 169 - -
Ahy18g2673 342 CDD homeodomain 271 323 IPR001356 GO:0003677
Ahy18g2673 342 PANTHER HOMEOBOX PROTEIN 8 33 337 - -
Ahy18g2673 342 MobiDBLite consensus disorder prediction 150 169 - -
Ahy18g2673 342 ProSiteProfiles 'Homeobox' domain profile. 268 328 IPR001356 GO:0003677
Ahy18g2673 342 PANTHER ZINC-FINGERS AND HOMEOBOXES RELATED 33 337 - -
Ahy18g2673 342 Coils Coil 115 135 - -
Ahy18g2673 342 SMART HOX_1 274 332 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2673 Ahy-Chr18 129776853 129780279 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Ahy18g2673 Homeodomain 4.60E-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2673 - - ccaj:109796293 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2673 18 129776853 129780279 Ahy18g2673 18 129776853 129780279 ECH
Ahy18g2673 18 129776853 129780279 Ahy8g2425 8 46900900 46904298 hybridization