Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2659 ATGGAAAACCCCAGATGCCCTAATCTGATATTGTCCTCTCACCCATGGAGGCTTGGAGGCCGTCCTCATCGGTCATCGTTTGTGTTGTTTGTGTATGTACTTAAAGTGACTGTGGCCTTCAACTTCTGGATCCCTGATAACGTCGGAGGTTGGAATCGAAGTAAACGGTCATCGCGGAGGCCTTGTTTATCTTACCCGCCCGATCGCACGAGTTGGCACCATAGATCGCAGCTCGTCTTAGTAACAGGTGGTGGACATCGCGCAATTTTGTTCGTCGACGCGGTGGTCCCATCGCCCTGTGTAATAATGGCATCAAGTAGCAAGTTTTGCAAGGATGCGTGTATGTGGAATGAGCCTCTTGCGGACAACTGGATGGAGGGCAAGGGTGGTGTGTCGAATTCTCAGGACACAATGTATGATACGAGAGTGGAGGAAGACGCTGAGTTATCCGATTGGGAAGGAAGGGGGGCTTCAATGTTGCCCGTTTTTTTGGGTTTGGATGGGTTGCAAGCAGAAGATGTGCTTGAAATGGAGTTTTCTTCACCTCAGGAGGCAAGCGGCTTCTATAACAATTACAGCCGACTAAAGCGGTTTGCATCAAGGCGAGGCAAGACGGTTAGAAACACTGCCGGAGAGATAGTGTGGTACACGTTTGTTTGTAATAGGCAAGGATTTCGAGAGAAGAAATGGTTGGAAAAGGTTGATCGCAAAAGGGAGCATAAGGTTGTAACCCGATGCGGATGCATGGCGGAGATGAGGATAAAGAGGAAAGAGGGTAGTGGGAGGTGGTATGTGTCGCGTTTTGTCGAGGAGCATAACCACGAACTTGCGTATGGGAAGCTTGTTGATTATCTGCGGTCACACAGGAAGATATCTGAGGTAGAAGTTGCTCAGCTAACAAGCATGAGGGAGATTGGGATTAGCATACCTAAGATTTATGAGTCTTTCGCAGCACAACTAGGGGGCTTTAATCTGGTAACATTCACAAAGCAAGATATGTATAATGAGATACGGAAACAGAGAGGTCTGCAAGGCGGAGACGTAAGTGCAGCTATTAGGTACTTGGAAGGTCTGGCACGCATGGATGGGAAAATGTTTTGGCGGTACAAGTTGGGGGCAGGGCAACACCTATGCAACTTGTTTTGGAGCGACAGTCGTTGTCAGGAAGATTATGGGATATTCGGCGATGTGCTAGCATTCGATGCTACCTATGGCCGCAACAAGTACAACCTACCTGTTGTAGTCTTTTCCGGAGTAAACCACCACAACCAGACATGCGTATTCGGAACAGCAATGGTCTCATGCGAATCGCAGGAGTCATATATTTGGGTTCTTCGCCAGTTCCTGGAATGCATGCAAGGTAAGGCACCGCATTCAGTCATCACGGATGGCGACCCGGCCATGCGGATAGCAATCCGGTCCGTTTTTCCTGAGGCACATCATCGTTTGTGTGCCTGGCATCTGCTGAGGAACGCGACTGTTAACATAAGCGACCCGAGATTCACACAAATGTTTAGACACTGCATGCTGGCAGATATGGAAATCGAGGAGTTCGAAGCGCATTGGGAGTCAATGCTCAACGAGTGCGGTGTTAGGGAGGTTGAGTGGGTTAAGGAGTTGTACAGCAAAAAGCACGCTTGGGCAACCGCATACATTCGTGGTAGATTTTTTGCTGGAGTACGGACAACCTCTAGGTGCGAGTCACTGCATGCCAAACTAGGTAGGTTTGTTGAGAGCAGGTATGGGGTGTTAGAATTTGTCAGAAATTTTCAAAGGTGTGTGGATTTTCTTCGTGACACGGAGGACGAGCTAGACTTTCGTTCATGGTACGGAACACCTGTGCTACAAACAGAGTTTGTTGAGCTGGAAAAGTCTGGATGGACTGTGTTCACCCGCGAAATGTTTGTCAGATTCCGGGATAGCCTGAAACGGTGTGTTCGTGTTAGAATATGTGAATTTAATGACAGTGAGAACCCTCATACATATACTCTCCAGAAGTATCGGAGGCCTGAGATGAATTGGAAGGTTTATAGGGACCATATCTCGAACAGATTTAGCTGCAGCTGCATGCGTATGGAGTCGTTTGGCATTCCTTGTGTGCATATCCTTTCCGTCTGTGTTATGCTAGACTTGGTGGAAATCCCTGAAAGCCTTGTGCTGCGTAGGTGGTCTAAGGCAGCCAAATTGGAGATACATAACCAATGTGTTGAGCAACAGACTGCTGACCCAAGTGTGACCTATAGGACACGATTGGGTGCTTTCTCCCAGCTGTGTAAGCGTTTAGGGCGCGTTGCTTGCATGAGTGATGAAGACTTCAAGCTTTACTCAAAGAAGCTTCTGAGCGATGCTCTCTTCCTTGAAATAAAGTATGGCTTAAGACCATCAACGGATGATATCACAACAGCAAATGATTGCGGGGTGAAAGACCCCATTCGTGTCAGAACAAAAGGCACTGGTCGGATGAGCCAAGCAGGCGGTTCTGCGCCGAAAACTAAAAGAAAGTGCAGCACATGCGGGAAGCTAGGGCACCGAAGGACTAGATGCCCCAATGGAGCCGCGCAAGCTTCAACGAGGATCAATGAATCACATGGTGGAAGAAACAAACGCAAGCGATCAAAGGTGTGTGGTTTGACGTTCTTGTTAATGCAGCAGGTACCCGTCGTTGTCCGAGATAATTGTCAGCCTGAAAATGCATGTCAAGCCGGAAGCGACAAATGGGAACACTTTTCGCTTGCAGACCCATGA 2745 0.4831 MENPRCPNLILSSHPWRLGGRPHRSSFVLFVYVLKVTVAFNFWIPDNVGGWNRSKRSSRRPCLSYPPDRTSWHHRSQLVLVTGGGHRAILFVDAVVPSPCVIMASSSKFCKDACMWNEPLADNWMEGKGGVSNSQDTMYDTRVEEDAELSDWEGRGASMLPVFLGLDGLQAEDVLEMEFSSPQEASGFYNNYSRLKRFASRRGKTVRNTAGEIVWYTFVCNRQGFREKKWLEKVDRKREHKVVTRCGCMAEMRIKRKEGSGRWYVSRFVEEHNHELAYGKLVDYLRSHRKISEVEVAQLTSMREIGISIPKIYESFAAQLGGFNLVTFTKQDMYNEIRKQRGLQGGDVSAAIRYLEGLARMDGKMFWRYKLGAGQHLCNLFWSDSRCQEDYGIFGDVLAFDATYGRNKYNLPVVVFSGVNHHNQTCVFGTAMVSCESQESYIWVLRQFLECMQGKAPHSVITDGDPAMRIAIRSVFPEAHHRLCAWHLLRNATVNISDPRFTQMFRHCMLADMEIEEFEAHWESMLNECGVREVEWVKELYSKKHAWATAYIRGRFFAGVRTTSRCESLHAKLGRFVESRYGVLEFVRNFQRCVDFLRDTEDELDFRSWYGTPVLQTEFVELEKSGWTVFTREMFVRFRDSLKRCVRVRICEFNDSENPHTYTLQKYRRPEMNWKVYRDHISNRFSCSCMRMESFGIPCVHILSVCVMLDLVEIPESLVLRRWSKAAKLEIHNQCVEQQTADPSVTYRTRLGAFSQLCKRLGRVACMSDEDFKLYSKKLLSDALFLEIKYGLRPSTDDITTANDCGVKDPIRVRTKGTGRMSQAGGSAPKTKRKCSTCGKLGHRRTRCPNGAAQASTRINESHGGRNKRKRSKVCGLTFLLMQQVPVVVRDNCQPENACQAGSDKWEHFSLADP* 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2659 914 PANTHER OS02G0262500 PROTEIN 173 750 - -
Ahy18g2659 914 SUPERFAMILY Retrovirus zinc finger-like domains 814 853 IPR036875 GO:0003676|GO:0008270
Ahy18g2659 914 ProSiteProfiles Zinc finger SWIM-type profile. 677 710 IPR007527 GO:0008270
Ahy18g2659 914 Pfam MULE transposase domain 397 491 IPR018289 -
Ahy18g2659 914 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 173 750 IPR031052 GO:0006355
Ahy18g2659 914 Pfam SWIM zinc finger 686 708 IPR007527 GO:0008270
Ahy18g2659 914 Pfam FAR1 DNA-binding domain 188 277 IPR004330 -
Ahy18g2659 914 SMART 26again6 685 712 IPR006564 GO:0008270
Ahy18g2659 914 ProSiteProfiles Zinc finger CCHC-type profile. 833 850 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2659 Ahy-Chr18 129494960 129499564 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy18g2659 MULE 5.40E-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2659 - - aip:107611673 1904.03