Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2637 ATGAAAAGAAAAATGAGAAGGCGTGGAAAGAAGGTATTTGCAAGATTGTGTGGTGGTGCCCGTGGTGGTGACGACGACGAGGACGAAGAAGACACCTTTCCTGAGAGCCAAAGGAGGGATCACATTGCGGAGTTTGATTATGAAGGAAGCCAATACAGCCTCGCCGGTCTTCCTCTTCCCTCGCTCGGCTCCACTTCCCACAGACTCAAGCTCCGTCCTTACATTGTTTCTCCCTTCAACCACAATTACAGACTTTGGCAGACATTTCTGGTGTTCTTGGTGTTCTATAATGCATGGGTTTGTCCCTTTGAATTTGCATTCCTTAACCAAAAAATGGTCGCAATCTTCGTAGCTGACAATGTTGTCAATGGATTCTTTGCTGTTGACATTGTTCTCACCTTCTTTGTTGCATACCTAGACAAGACTACCTATTTGCTAGTTGATGATAAAAGCCTAATTGCTTTGAGGTATGCCAAATCATGGTTGGCTTTAGATGTCATCTCCACTATCCCCTCTGAAGTTGCTCATAGGTTTTTGCCCGCTGCCCTGAAAAAATATGCTTACTTCAACATGCTTCGCCTTTGGCGTCTTCGCCGAGTCAGTGCCTTGTTTGCAAGATTAGAGAAGGACAGGCATTATAATTACTTCTGGGTTCGCTGCTCAAAACTGATCTGTGTTACATTATTCGCAGCTCATTTTGCTGCTTGCATTTTCCATTTTATCACTCTGAATCGTGAAACCGGACAAACATGGCTTTCGCTTCTTCCGGAAGTCGATGATCATAGTGTCACAAATCTCTATATAGCATCAATTTACTGGTCCATAGCAACTCTTACAACGGTTGGTTATGGAGATCTACATCCTACGAACACAAGGGAGACTCTTTTTGATACTTTCTATATGCTCTTCAATCTTGGGCTAACTGCATATCTCATAGGTAACATGACAAATTTGGTCGTTCATGGGACAAGCAGAACTAGGAAATATAGAGACACAATTCAAGCTGTGACAAGTTTTGCCAAACGGAATAAATTGCCTGTTCTCATGCAAGAACAGATGATTGCACATTTGCATATGAAGTACAGAACTGATATAGAAGGGCTGCAGCAGCAAGAGATTATCGAATTACTCCCGAAAGCTATTCGTTCTAGCATCTCTCATTACCTATTCTATGAACTTTTGGAGGATATCTACTTGTTTAATGGGGTGTCACATGATCTGCTTTTTCAACTGGTCTCAGAGATGAAGCCCGAGTATTTTCCTCCAAAGGAAGATGTGATTTTGCAGAATGAAGCACCAACAGACTTCTATGTATTGGTCACTGGTGCTGTGGAAGTTATTCTCAAAGGACAGAATAGAACTGAACAGGTAGTTGGTGAGATAAAGGCAGGAGAATTAGTTGGAGAAGTTGGAGTTTTATGTTACAGGCCCCAGATGTTTACAGTTCGGACCAAACGATTGTGCCAACTTCTGCGCTTGAGCCGGACTACATTTATAAATCTTGCTCACTCCAATGTTGGAGATGGGACAATTATGATGAACAATTTTCTTAAGCATTTGCATGAATCCCAGGCACCAGGAATGGATATTATTTTCCGAGAGACAGAGGCCATGCTGGCACGTGGTAAATTGGATTTGCCTATCAGCACATGCTTTGCAGTAAACCGAAATGATGATATATTGTTGCAACGGCTGCTGAAGAAGGGTATGGATCCAAATGAAGGCGACCCAGATGGAAGGACACCGCTGCATATTGCAGCTTCTAAAGGCAATGAGAAGTGTATATCTGTGCTTCTGGAATATGATGCTGATCCCAACATCAGAGATAAGGAAGGAAATCTTCCACTGTTTGAAGCACTTATAAGTGGTAACGACTCCATTGTGAAACTCCTTCTGGAGCATGGTGCAGTGTTAGAACCTGCCGATGCAGGCCACCTGGCATGCATTGCTGTTGAGAAAAATAGCATGGAACTGCTCAATAGAATTTGTCAATATGGTTGGGATGTGACACAACCCACACACAATGGAACCACTGCTCTTCACACTGCAGTGTGTGAAGGAAACCTCCAAATGACAAAGTTCCTTGTCGAAAAAGGAGCCAACATTGATCTGCAAGACGCTACCGGCTGGACTCCAAGGACCTTGGCGGATCAACAAGACCATGATGAAATCAAAAGTATGTTTCAGAAGATTGGAGAGAGGACAGGTCCAATTCCTGCTGCTATTCCACCATCAAATCGCAAGCACTTGCCTAACCTTGGAAGGTACCAAAGTGAACCAACTATGCGTAGTATTCCCCAAACAAACATTGGACAGTTCCACTCGCCACGCAATCCAGAAGATATGTTCTTTGACAATACTAAAAGAAGAAGAAACAACAATTTTAACAATTCCATTTTTGGGATGATGTCGGCAGCTAACCATAATCAAAGAGAGCGTGAGGCATCCAAAAAATTTAACAATCATAGGTTGAACAAGGATGACTTTGTTGGCAGATTGACATTAAGTTGTCCTGAAAAGGGTGAACATGCTGGAAAGCTTGTTATGCTGCCAAATACCATTCAGGAACTGCTAGATATTGGAGCTAAAATGTTTGACTTTACTGCTGTCAAAATTTTGACCAAAGAAGGAGCTGAAGTGGATGACATAAATCTCATAAGAGATGGTGATCATCTTATTATTGCACATAAATGA 2694 0.4235 MKRKMRRRGKKVFARLCGGARGGDDDEDEEDTFPESQRRDHIAEFDYEGSQYSLAGLPLPSLGSTSHRLKLRPYIVSPFNHNYRLWQTFLVFLVFYNAWVCPFEFAFLNQKMVAIFVADNVVNGFFAVDIVLTFFVAYLDKTTYLLVDDKSLIALRYAKSWLALDVISTIPSEVAHRFLPAALKKYAYFNMLRLWRLRRVSALFARLEKDRHYNYFWVRCSKLICVTLFAAHFAACIFHFITLNRETGQTWLSLLPEVDDHSVTNLYIASIYWSIATLTTVGYGDLHPTNTRETLFDTFYMLFNLGLTAYLIGNMTNLVVHGTSRTRKYRDTIQAVTSFAKRNKLPVLMQEQMIAHLHMKYRTDIEGLQQQEIIELLPKAIRSSISHYLFYELLEDIYLFNGVSHDLLFQLVSEMKPEYFPPKEDVILQNEAPTDFYVLVTGAVEVILKGQNRTEQVVGEIKAGELVGEVGVLCYRPQMFTVRTKRLCQLLRLSRTTFINLAHSNVGDGTIMMNNFLKHLHESQAPGMDIIFRETEAMLARGKLDLPISTCFAVNRNDDILLQRLLKKGMDPNEGDPDGRTPLHIAASKGNEKCISVLLEYDADPNIRDKEGNLPLFEALISGNDSIVKLLLEHGAVLEPADAGHLACIAVEKNSMELLNRICQYGWDVTQPTHNGTTALHTAVCEGNLQMTKFLVEKGANIDLQDATGWTPRTLADQQDHDEIKSMFQKIGERTGPIPAAIPPSNRKHLPNLGRYQSEPTMRSIPQTNIGQFHSPRNPEDMFFDNTKRRRNNNFNNSIFGMMSAANHNQREREASKKFNNHRLNKDDFVGRLTLSCPEKGEHAGKLVMLPNTIQELLDIGAKMFDFTAVKILTKEGAEVDDINLIRDGDHLIIAHK* 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2637 897 ProSiteProfiles Ankyrin repeat region circular profile. 675 706 - -
Ahy18g2637 897 CDD CAP_ED 399 513 IPR000595 -
Ahy18g2637 897 MobiDBLite consensus disorder prediction 1 37 - -
Ahy18g2637 897 ProSiteProfiles Ankyrin repeat region circular profile. 578 610 - -
Ahy18g2637 897 ProSiteProfiles Ankyrin repeat profile. 578 610 IPR002110 GO:0005515
Ahy18g2637 897 ProSiteProfiles Ankyrin repeat profile. 675 707 IPR002110 GO:0005515
Ahy18g2637 897 ProSiteProfiles KHA domain profile. 832 897 IPR021789 -
Ahy18g2637 897 PRINTS EAG/ELK/ERG potassium channel family signature 130 139 IPR003938 GO:0005249|GO:0006813|GO:0016020
Ahy18g2637 897 PRINTS EAG/ELK/ERG potassium channel family signature 311 320 IPR003938 GO:0005249|GO:0006813|GO:0016020
Ahy18g2637 897 PRINTS EAG/ELK/ERG potassium channel family signature 267 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Ahy18g2637 897 PRINTS EAG/ELK/ERG potassium channel family signature 119 129 IPR003938 GO:0005249|GO:0006813|GO:0016020
Ahy18g2637 897 SUPERFAMILY Voltage-gated potassium channels 78 320 - -
Ahy18g2637 897 Pfam Ankyrin repeats (3 copies) 649 723 IPR002110 GO:0005515
Ahy18g2637 897 Pfam Ankyrin repeats (3 copies) 552 637 IPR002110 GO:0005515
Ahy18g2637 897 ProSiteProfiles Ankyrin repeat region circular profile. 611 636 - -
Ahy18g2637 897 ProSiteProfiles cAMP/cGMP binding motif profile. 399 519 IPR000595 -
Ahy18g2637 897 Gene3D Helix hairpin bin 322 388 - -
Ahy18g2637 897 PRINTS Ankyrin repeat signature 691 705 IPR002110 GO:0005515
Ahy18g2637 897 PRINTS Ankyrin repeat signature 579 594 IPR002110 GO:0005515
Ahy18g2637 897 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 41 896 - -
Ahy18g2637 897 SMART ANK_2a 545 574 IPR002110 GO:0005515
Ahy18g2637 897 SMART ANK_2a 578 607 IPR002110 GO:0005515
Ahy18g2637 897 SMART ANK_2a 675 704 IPR002110 GO:0005515
Ahy18g2637 897 SMART ANK_2a 611 642 IPR002110 GO:0005515
Ahy18g2637 897 SUPERFAMILY cAMP-binding domain-like 324 520 IPR018490 -
Ahy18g2637 897 Gene3D Jelly Rolls 390 535 IPR014710 -
Ahy18g2637 897 SUPERFAMILY Ankyrin repeat 552 732 IPR036770 -
Ahy18g2637 897 ProSiteProfiles Ankyrin repeat profile. 611 643 IPR002110 GO:0005515
Ahy18g2637 897 Pfam Cyclic nucleotide-binding domain 418 504 IPR000595 -
Ahy18g2637 897 SMART cnmp_10 399 517 IPR000595 -
Ahy18g2637 897 Gene3D - 84 320 - -
Ahy18g2637 897 Gene3D - 547 730 IPR036770 -
Ahy18g2637 897 Pfam KHA, dimerisation domain of potassium ion channel 832 894 IPR021789 -
Ahy18g2637 897 PANTHER POTASSIUM CHANNEL AKT1 41 896 IPR045319 GO:0005249|GO:0006813
Ahy18g2637 897 Pfam Ion transport protein 84 326 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2637 Ahy-Chr18 129018815 129025092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2637 35 895 Ion Channels AT2G25600 54.857 0.0 937
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2637 K21867 - gmx:100802964 1119.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2637 18 129018815 129025092 Ahy18g2637 18 129018815 129025092 ECH
Ahy18g2637 18 129018815 129025092 Ahy8g2404 8 46664974 46670994 hybridization