Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2631 ATGGGGAAGAAGAAGCAGAAGGAGAAGATAGTTCTTCCACCGGAGCTCCCGCCGGAGATTCCCGACGACGAGGTCGAGGTCTCCGATGAGGACCTCCAGTTCGTCAATGAGAATCGCGGTTACGCTTCCTTATTCTCCACCCTTGACACGCAATCAATCACCAAGCATGTTACTCGAGTTGCTGATGCTAAAGATGATGCTTTGGAGAAACTTTATGAGAAAAAGCTGCGAAAGAATGCTCTCAAGAAGGAAAAAGAAGAAACAGGAATACAGGTTGACCGAGTTGATGTTCTTCCAATCAAGTCTTTGGATGGACAACTCCATTACCGGACAGCTACAAAGGCAGAATCACAAAATGGTCCAAGTGAAGAGGAAACGGGAGAGGATGTAAATGATAGAAAAAGTCTGGTGAAGCTAACTAAGGCTGAAAAGAGAGCCAAACTTAAGAAGTTGAGGAAGGAGGGGAAAAAGCAAGGGAAAGAGGTGCCAAAAGCAGAAGTGGAACAAACACCACAAGCCACTGTACTGGCTGAGGTAAAAGAAGATCTTACAACTGAGGAGGCTTTTGAATCTAAGAAGTGTAAACTTGCAGAGTTGGGAAATGCATTACTTACAGACCCTGAGTCCAATATTAAATTTCTGAAGGATATGCTACAGATATCTAAAGACAATGATCCTACCATTGTTAAACTTGGACTTCTGTCACTCTTGGCTGTATTTAAAGATATTGTCCCTGGCTATCGAATAAGGCTTCCTACTGAGAAAGAACTGGAAATGAAGGTTTCAAAGACTGTGAGAAAGATGCGTTACTATGAATCAACTCTACTTTCGGCATACAAGGCATACCTGCAAAGGCTGATGTACTTAGAAAAGAAGCCCTTATTTCAACTTGTAGCAGTACGTTGTATTTGTACATTGCTCGACATACATCCTCATTTCAACTTCAGGGAAAACCTGTTGGATGCTACTGTCAGAAACATAAGCTCTACTAATGAGGCCATAAGGAAACTTTGTTGTTCTACAGTTAAATCATTGTTTACAAATGAGGGTAAACATGGTGGTGAGGCTACTGTAGAGGCTGTTCGATTGATTGCCGATCTTGTCAAGGCTAATAATTGTCAGTTGCATCCTGATTCCGTTGAGGTGTTTTTGTCTCTTTCATTTGATGAGGATCTTGGGAAGTCTGAGAAGAAAGAAGAGGATCATAAATTTAAAAACAAGAAAAATAAGAAGAGAAAAAACATGGAGGCATCAAATCAGTTGCCAGATAATGATAGAAAGAGAAGTAAGCATGAAATGATCTCTAAGACAAAAGAGGAGGTTGAAGCTGAGTACAAGGCTGCATCGTTTGCTCCAGATGTTATGGAGAGGAGACAAATGCAATCTGAAACACTCTCTGCCGTGTTTGAGACGTATTTTCGCATTTTGAAGCACACAATGCATTTCATAGCAACCAGGCCTGAAGTAAATACTGGGGCATCATCTGCAGTGGAATCCCACCCATTGTTTGCTCCTTGTCTCAAAGGACTGGGAAAGTTTTCACATTTGATTGACCTCGACTTCATGGGGGACCTAATGAACCATCTCAAAGTACTTGCTTCTGATGGTAGTAACTCTGGCAACAGTTCTGAGAAGTGTCCTAAATTTTTGACTGTGACTGAACGTCTCCAATGTTGCATTGTTGCTTTTAAAGTGATGAGGAATAATCTTGATGCTCTGATTGTTGATTTGCAAGACTTCTTCGTCCATCTTTACAGTCTTATACTTGAATACAGGCCTGGAAGAGATCAAGGAGAGGTGTTAGCAGAAGCTTTGAAGATAATGTTGTGTGAAGATAAGCAACATGACATGCAAAAGACTGCTGCATTCATAAAGCGTTTGGCTACATTGTCGCTGTGCTTTGGATCTGCGGAGTCCATGGCTGCATTGGTCACAGTAAGGCATCTCCTTCAAAAGAATGTGAAGTGCAGAAATCTGTTGGAAAATGACACTGGAGGGGGCTCAGTTTCCGGAACAATCCCAAAATATCAACCATATTCCACGGATCCCAATTTAAGTGGAGCTCTTGCTTCTGTGCTTTGGGAACTCAATCTTTTGTCCAAGCATTATCATCCTTCTATATCAACAATGGCCTCTGGTATATCAAGCATGAGTGTTGCACAGAATCAAGTCATTCTCTCAAAAACCTCTCCTACACAAGCTTTAATGGAAATGTCTCTTGATCAGGAATTAACTTTCCCGCAACATAGTGGCACTATAAAATTGAATAACAAGAAGAGAAGAACAAATGGTCCTGCAACATCACCCTCCATTGGTTCTGCATCAGTCACTTCAAGTTCATTCAATGAGGATGAGTTGCATGAGAAACTTGGTTCCCATTTTACGCTTCTTCGCGACATTAGGGAGAATGAAAGGTTGAGAAAGGAGTTGGATAAGACTACACTATCACTACAGCTATATGAACAATATAAGAAACAAAAGCAAAGATCAAAACCAAAGAAGAAAGCCATTGCTTAA 2517 0.4116 MGKKKQKEKIVLPPELPPEIPDDEVEVSDEDLQFVNENRGYASLFSTLDTQSITKHVTRVADAKDDALEKLYEKKLRKNALKKEKEETGIQVDRVDVLPIKSLDGQLHYRTATKAESQNGPSEEETGEDVNDRKSLVKLTKAEKRAKLKKLRKEGKKQGKEVPKAEVEQTPQATVLAEVKEDLTTEEAFESKKCKLAELGNALLTDPESNIKFLKDMLQISKDNDPTIVKLGLLSLLAVFKDIVPGYRIRLPTEKELEMKVSKTVRKMRYYESTLLSAYKAYLQRLMYLEKKPLFQLVAVRCICTLLDIHPHFNFRENLLDATVRNISSTNEAIRKLCCSTVKSLFTNEGKHGGEATVEAVRLIADLVKANNCQLHPDSVEVFLSLSFDEDLGKSEKKEEDHKFKNKKNKKRKNMEASNQLPDNDRKRSKHEMISKTKEEVEAEYKAASFAPDVMERRQMQSETLSAVFETYFRILKHTMHFIATRPEVNTGASSAVESHPLFAPCLKGLGKFSHLIDLDFMGDLMNHLKVLASDGSNSGNSSEKCPKFLTVTERLQCCIVAFKVMRNNLDALIVDLQDFFVHLYSLILEYRPGRDQGEVLAEALKIMLCEDKQHDMQKTAAFIKRLATLSLCFGSAESMAALVTVRHLLQKNVKCRNLLENDTGGGSVSGTIPKYQPYSTDPNLSGALASVLWELNLLSKHYHPSISTMASGISSMSVAQNQVILSKTSPTQALMEMSLDQELTFPQHSGTIKLNNKKRRTNGPATSPSIGSASVTSSSFNEDELHEKLGSHFTLLRDIRENERLRKELDKTTLSLQLYEQYKKQKQRSKPKKKAIA* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2631 838 Pfam CBF/Mak21 family 556 711 IPR005612 -
Ahy18g2631 838 SUPERFAMILY ARM repeat 210 606 IPR016024 -
Ahy18g2631 838 MobiDBLite consensus disorder prediction 413 438 - -
Ahy18g2631 838 PIRSF Noc3 1 814 IPR016903 -
Ahy18g2631 838 MobiDBLite consensus disorder prediction 110 136 - -
Ahy18g2631 838 MobiDBLite consensus disorder prediction 397 438 - -
Ahy18g2631 838 Pfam Nucleolar complex-associated protein 192 282 IPR011501 -
Ahy18g2631 838 MobiDBLite consensus disorder prediction 150 169 - -
Ahy18g2631 838 MobiDBLite consensus disorder prediction 747 779 - -
Ahy18g2631 838 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 3 781 IPR016903 -
Ahy18g2631 838 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2631 Ahy-Chr18 128953345 128960761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2631 1 810 Core DNA Replication Machinery Family AT1G79150 57.927 0.0 915
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2631 K14834 - gmx:100776136 1236.48