Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2622 ATGGAGAATGATGAACTGAGAGTGGCGAGCGCACGCTTAGGAAGCTCACGTGTATGGAGCAGTGGTGCAGTTGATGTGTTCTCAGGCTCTTCGAGACGAGACGACGACGAAGAACAGCTCAAATGGGCGGCGATCGAGAAGCTTCCAACATATCGACGCTTAACAAGAGGCATACTAACCGAATCGCAAGGCGAATACACCGAGATCGATGTCAACAAACTCGGTCCCTTGCAGAGGAAGAAATTAGTAGAAAGGCTAGTCAAGATTGCTGAACAAGACAATGAGAAGTTCTTGTTGAAATTGAGAAGAAGAATCGATAGAGTTGGACTTGATATTCCGATGATTGAAGTCCGATTCGAGCATTTGAATGTTGAAGCTGAGGCTCATGTTGGAAGCAGGGCATTGCCAACAAACCTTAACTTCTGCATTAATTTGTTAGAGGGGATCCTGAATTCTTTTCGCATTCTTCCGAGTCGAAAGAAGCCATTCACAGTTCTTCATGATGTTAGTGGAATCATCAAGCCTAGAAGGATGACACTGCTCTTAGGCCCTCCAAGCTCCGGAAAGACCACGCTGTTGCTAGCACTGGCCGGAAGACTCGGCAAAGATCTTAAAGTAAGGACATGTGATGTCAGCAAGTTTTCTGGGAGAGTTTCCTACAATGGTCATGAAATGGAGGAATTTGTGCCTCAGAGAACATCAGCTTACATAAGTCAAACTGATCTCCACATAGGGGAGCTTACAGTCAAAGAAACATTGGCCTTTTCAGCAAGGTGTCAAGGGATCGGAACGCGTTACGATATGCTGGCAGAATTATCAAGAAGAGAAAAGGCACAAAACATTAAGCCAGATCCTGATCTAGATATTTATATGAAGGCTGCAGCACTGGAAGGCCAAGAAACCAATGTAGTTACAGATTATATAATGAAGATTTTGGGTCTAGAAGTATGTGCTGACACCATGGTAGGGGATGAAATGATTAGGGGGATTTCTGGTGGACAGAAAAAGAGAGTCACAACTGGTGAGATGCTAGTTGGACCAGCAAGGGCACTTTTCATGGATGAAATATCAACTGGTTTGGATACTTCTACAACATTCCAAATGGTTAATTCTTTGAGACAATCCATTCACATTTTGAATGGAACTGCTGTGATATCTCTTCTCCAACCAGCACCAGAAACTTATGAACTATTTGATGATGTAATTCTCCTATCAGATGGACAAATTGTGTATCAGGGTCCAAGAGAAAATGTTCTTGAGTTCTTTGAATACATGGGATTCAAATGTCCAAACAGAAAAGGAGAAGCTGATTTCTTGCAAGAGGTAACATCAAGAAAAGATCAAGAGCAGTACTGGGCAAACAATGATGAGCCTTATACCTTTGTCTCTGTAAGAGAATTTGCAGATGCATTTCGGTCATTTCACATCGGCCGGAAACTTGGCAATGAGCTTGCTACCCCGTTCGACAAGACCAGAGGCCACCCTGCTGTTCTAACCAAGAACAAGTATGGTGTCAGCAAGAGGGAATTGCTAAGAGCTTGTGTTTCAAGAGAATTCTTGCTCATGAAAAGGAACTCCTTTGTCTACATTTTCAAGATGTGCCAATTGACTATATCAGGAATCATAACAATGACATTGTTCTTGAGGACTGAGATGCACCGGAACACAGTATCTGATGGCGGGATCTACATGGGAGCTTTGTACTTTGTTCTGATTATGATAATGTTCAATGGATTCTCTGAGCTATCCATGACCGTTGCAAAGCTCCCTGTTTTTTATAAGCAAAGGGACCTTCTCTTCTATCCTTCTTGGGCATACTCCTTGCCATTATGGATCCTTAAGATTCCTATCACTTTGGTAGAAGTTGGTATTTGGGTTGTCATGACTTACTATGTTATAGGCTTTGATCCAAATATTGAAAGGTTCATCAAGCAGTATCTTCTGCTAGCTTGCATCAACCAGATGGCCGCTTCACTTTTTCGATTTATTGGGGCAGTTGGGAGGAACCTCGTTGTGGCCAACGCATTTGGAGTATTTTCTTTAATTGCAATTATGGTCATGGGTGGATTCGTCCTATCTAGAGTTGATGTGAGGAAGTGGTGGTTATGGGGTTACTGGACCTCTCCCATGATGTACGGACAGAATGCTTTAGCTGTGAATGAATTCCTGGGAAACAGTTGGAAACATGTTCCACCTAATTCAACAGAATCATTAGGTGTTCAGGTCTTAAAAGCACGTGGAATATTCCCTGAAGCATATTGGTATTGGATTGGAGTAGGAGCTTCCATTGGATACATGTTACTCTTCAATTTGCTTTTCCCTTTGGCCTTGCATTTTCTTGACCCATTTGGCAAACCACAAGCATTGATATCAGAAGAAGCTTTAGCTGAGAGGAATTCTGTTAGGAATGATCACATCATTGAACTTTCTTCTGGAAGGAATGGAGCTTCTGATAAAAGTAATGGAAGAAGTGTGTCATCAAGAACCTTGTCTGCAAGAGTTGTTGCCATTAATGGAACCGATCGCGACAGAAAGTGTGGGATGGTTCTTCCTTTCACGCCTCTTTCTATCACTTTTGATGAAATCAGATATGCAGTAGACATGCCACAGGAAATGACGGCCCAAGGCATAGTTGAAGATAAAGTTGAACTGTTGAAGGGTATAAGTGGAGCTTTTAGACCAGGAGTTCTAACAGCTCTAATGGGTGTAAGTGGAGCTGGTAAAACCACTCTAATGGATGTGTTATCTGGGAGGAAAACTGCAGGATATATTCAAGGTCAAATCACCATATCAGGGTACCCTAAGAAGCAAGAAACATTCGCTCGCATATCCGGATATTGTGAGCAAACTGACATACACTCTCCCCATGTCACAGTCTATGAGTCACTTGTTTATTCTGCATGGCTAAGGTTACCCCCTGAGGTTGATTCTTCTACAAGAGAGATGTTCATTGAAGAAGTTATGGAGCTGGTAGAGCTGAATTCATTGAGAGATGCATTGGTTGGATTACCTGGAGTGAATGGTTTGTCCACAGAGCAGCGCAAGAGGCTAACTATTGCGGTTGAACTTGTTGCAAATCCTTCTATAATATTCATGGATGAACCTACCTCCGGCCTTGATGCCAGGGCTGCTGCTATAGTTATGAGGACAGTGAGGAACACAGTCAACACAGGCCGAACCGTGGTGTGCACAATCCACCAGCCTAGCATTGATATATTTGATGTTTTCGATGAGTTATTTCTCTTGAAGCGTGGAGGTGAAGAGATATATGTTGGGCCATTAGGCCGCCATTCTTCTCATCTTATCAGTTACTTTGAGGGAATTAATGGAGTGCCAAAGATCAAGAATGGTTATAATCCTGCAACCTGGATGTTGGAGGTTACTTCAGAAACACAAGAGGAAGCTCTAGGAATTAACTTTGCTGAACTATACAAGAATTCTGATCTATACAGGGGAAACAAGGCGCTGATAAGTGAACTAAGTACACCCCCATCAGATTCTAAGGACTTATACTTTCCAACAAAGTACTCACAGTCCTTCGTAACCCAATGTAAGGCTTGCCTTTGGAAACAGAACCTATCATATTGGAGAAACCCTCCATACAGTGCAGTGAGACTCTTGTTCACAACATTCTTAGCCCTTTTGTTTGGGACAATTTTCTGGGATTTTGGCTCCAAAAGGAAAAGAGCACAAGATATATTTAATGCCATGGGATCCATGTATGCTGCAGTACTCAGCATTGGAGTACAAAATGCTAGTTCTGTGCAACCTGTTGTGGCCATTGAGAGAACAGTCTTTTATAGAGAAAAAGCTGCCGGCATGTACTCAGCTTTGCCATATGCATTTGGACAGGTTGCTATTGAGATCCCATACATATTGCTACAGACCCTGGCATATGGTGTCATAGTGTATGCCATGATTGGGTTTGAGTGGGCGGCTGCCAAGTTCTTTTGGTTTCTGTTCTTCATGTTCTTTACATTTTTTTACTACACCTTATACGGGATGATGGCTATTGGTATTACCCCAGATCACCATATTGCTGCCATAGTTTCTCTTGGGTTCTACTTGATATGGAACCTTTTCTCAGGATTTGTCATTCCTAGAACTAGAATGCCAGTGTGGTGGAGATGGTACTTTTGGATTTGTCCTGTGGCATGGACCATGTATGGATTAGTCACTTCACAGTTCGGTGATGTAACTGAACGCCTAGAGACTGGAGAAACTGTGGGAGATTTTGTAGAGAGATATTTTGGATATAGAGATGATTTCATTGGTATAGCTGCTGCTGTTGTTGTTGGCTTCACATTGCTCTTTGGATTCACCTTTGCCTTTTCAATTAAGGCATTTAATTTCCAAAAGAGATGA 4365 0.4238 MENDELRVASARLGSSRVWSSGAVDVFSGSSRRDDDEEQLKWAAIEKLPTYRRLTRGILTESQGEYTEIDVNKLGPLQRKKLVERLVKIAEQDNEKFLLKLRRRIDRVGLDIPMIEVRFEHLNVEAEAHVGSRALPTNLNFCINLLEGILNSFRILPSRKKPFTVLHDVSGIIKPRRMTLLLGPPSSGKTTLLLALAGRLGKDLKVRTCDVSKFSGRVSYNGHEMEEFVPQRTSAYISQTDLHIGELTVKETLAFSARCQGIGTRYDMLAELSRREKAQNIKPDPDLDIYMKAAALEGQETNVVTDYIMKILGLEVCADTMVGDEMIRGISGGQKKRVTTGEMLVGPARALFMDEISTGLDTSTTFQMVNSLRQSIHILNGTAVISLLQPAPETYELFDDVILLSDGQIVYQGPRENVLEFFEYMGFKCPNRKGEADFLQEVTSRKDQEQYWANNDEPYTFVSVREFADAFRSFHIGRKLGNELATPFDKTRGHPAVLTKNKYGVSKRELLRACVSREFLLMKRNSFVYIFKMCQLTISGIITMTLFLRTEMHRNTVSDGGIYMGALYFVLIMIMFNGFSELSMTVAKLPVFYKQRDLLFYPSWAYSLPLWILKIPITLVEVGIWVVMTYYVIGFDPNIERFIKQYLLLACINQMAASLFRFIGAVGRNLVVANAFGVFSLIAIMVMGGFVLSRVDVRKWWLWGYWTSPMMYGQNALAVNEFLGNSWKHVPPNSTESLGVQVLKARGIFPEAYWYWIGVGASIGYMLLFNLLFPLALHFLDPFGKPQALISEEALAERNSVRNDHIIELSSGRNGASDKSNGRSVSSRTLSARVVAINGTDRDRKCGMVLPFTPLSITFDEIRYAVDMPQEMTAQGIVEDKVELLKGISGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTAGYIQGQITISGYPKKQETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSSTREMFIEEVMELVELNSLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVNTGRTVVCTIHQPSIDIFDVFDELFLLKRGGEEIYVGPLGRHSSHLISYFEGINGVPKIKNGYNPATWMLEVTSETQEEALGINFAELYKNSDLYRGNKALISELSTPPSDSKDLYFPTKYSQSFVTQCKACLWKQNLSYWRNPPYSAVRLLFTTFLALLFGTIFWDFGSKRKRAQDIFNAMGSMYAAVLSIGVQNASSVQPVVAIERTVFYREKAAGMYSALPYAFGQVAIEIPYILLQTLAYGVIVYAMIGFEWAAAKFFWFLFFMFFTFFYYTLYGMMAIGITPDHHIAAIVSLGFYLIWNLFSGFVIPRTRMPVWWRWYFWICPVAWTMYGLVTSQFGDVTERLETGETVGDFVERYFGYRDDFIGIAAAVVVGFTLLFGFTFAFSIKAFNFQKR* 1455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2622 1454 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 857 1109 IPR003439 GO:0005524
Ahy18g2622 1454 Gene3D - 873 1099 IPR027417 -
Ahy18g2622 1454 Pfam ABC-transporter N-terminal 90 141 IPR029481 -
Ahy18g2622 1454 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 431 IPR027417 -
Ahy18g2622 1454 SMART AAA_5 175 415 IPR003593 -
Ahy18g2622 1454 SMART AAA_5 894 1086 IPR003593 -
Ahy18g2622 1454 CDD ABCG_PDR_domain2 854 1092 IPR034003 -
Ahy18g2622 1454 Gene3D - 151 466 IPR027417 -
Ahy18g2622 1454 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 880 1093 IPR027417 -
Ahy18g2622 1454 Pfam ABC-2 type transporter 1182 1396 IPR013525 GO:0016020|GO:0140359
Ahy18g2622 1454 Pfam ABC-2 type transporter 510 722 IPR013525 GO:0016020|GO:0140359
Ahy18g2622 1454 Pfam ABC transporter 166 356 IPR003439 GO:0005524
Ahy18g2622 1454 PANTHER ATP-BINDING CASSETTE TRANSPORTER 9 1454 - -
Ahy18g2622 1454 Pfam ABC-2 type transporter 389 440 IPR043926 GO:0140359
Ahy18g2622 1454 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 9 1454 - -
Ahy18g2622 1454 Pfam Plant PDR ABC transporter associated 727 790 IPR013581 -
Ahy18g2622 1454 Pfam ABC transporter 885 1037 IPR003439 GO:0005524
Ahy18g2622 1454 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 150 431 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2622 Ahy-Chr18 128755240 128765479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2622 882 1131 Calmodulin-binding Proteins AT2G36910 24.514 7.90e-07 52.0