Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2621 ATGGAGGAAATTGAAGGGTTCAATTGTGGTGAAAGTAAGAGCCCCATTGATGGTCGACCTCCGAATCCACCTTCTTCTGCTGCCTCTGCCTTTCGCCAATGCCATCACAACAAGAAACCCCTTGTTCGCCATCCTTCTCTTCAGATGATGACAAAACTTTCTGATGTATCCGTTGAACCGGAGCGTGCCACTGAAGATTGTCAATCTGATTTCCTTCCAAAGCTTCGTTCTGGAGGATGTGGTAATATGGGGTTCCGGTCAAGTATGGAAGATGTTTATGTTTGCGTTGACAATTTTATGCAAGAGAATGCACTCAAGAACCATATAGACGGACCTAGTGCTTTCTATGGGGTATTTGATGGACATGGTGGAAAGCATGCTGCTGATTTTGCTTGCCACCATTTACCAAAGTTCATTGTTCAAGATGATGATTTCCCAAGTGATATTGAGAGGATAATTGCTTCAGCATTTCTGCAAACTGACAATGCCTTCGCAGAAGCCTGCTCTGTGGATGCTACCCTTGCATCTGGCACTACGGCGTTGGCTGCTCTTGTTATTGGAAGGCAACTGGTGGTAGCAAATGCTGGAGATTGCCGAGCTGTGCTGTGTCGGCGTGGAAAAGCAATTGAAATGTCAAGAGATCATAAACCTGTGTGCATGAAAGAGAAGAAGCGTATTGAGGCATCTGGGGGGTATGTCTATGATGGATATCTTAATGGACAACTCAATGTTGCTCGTGCTATTGGCGATTGGCACGTGGAAGGGATGAAAAGCCGAGGCGGGGGACCACTCAGCGCAGAACCTGAGTTTATGAGTACAAAACTCACCGCCGAGGATGAATTCCTCATAATTGGTTGCGACGGGATTTGGGATGTATTTAGGAGCCAGAATGCAGTAGACTTTGCTCGCCGCAGGCTTCAGGAACATAATGACCCCACCATGTGTAGCAAGGATTTGGTTGATGAGGCTTTGAAAAGAAAGAGTGGAGACAATTTATCTGCTGTTGTAATTTGCTTCCAGCAACAACCTCCGCCTAACTTGGTGGTGCCGCGCTCGAGAGTGCACAGGAGCTTCTCCGCCGAAGGCTTGAGGGAGTTGCAAAGCTTCCTGGATAACTTAGGTAATTGA 1128 0.469 MEEIEGFNCGESKSPIDGRPPNPPSSAASAFRQCHHNKKPLVRHPSLQMMTKLSDVSVEPERATEDCQSDFLPKLRSGGCGNMGFRSSMEDVYVCVDNFMQENALKNHIDGPSAFYGVFDGHGGKHAADFACHHLPKFIVQDDDFPSDIERIIASAFLQTDNAFAEACSVDATLASGTTALAALVIGRQLVVANAGDCRAVLCRRGKAIEMSRDHKPVCMKEKKRIEASGGYVYDGYLNGQLNVARAIGDWHVEGMKSRGGGPLSAEPEFMSTKLTAEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPTMCSKDLVDEALKRKSGDNLSAVVICFQQQPPPNLVVPRSRVHRSFSAEGLRELQSFLDNLGN* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2621 375 ProSitePatterns PPM-type phosphatase domain signature. 115 123 IPR000222 GO:0043169
Ahy18g2621 375 ProSiteProfiles PPM-type phosphatase domain profile. 76 339 IPR001932 -
Ahy18g2621 375 SMART PP2C_4 66 337 IPR001932 -
Ahy18g2621 375 MobiDBLite consensus disorder prediction 1 31 - -
Ahy18g2621 375 Pfam Protein phosphatase 2C 77 331 IPR001932 -
Ahy18g2621 375 PANTHER PROTEIN PHOSPHATASE 2C 45 361 IPR015655 GO:0004722|GO:0006470
Ahy18g2621 375 SUPERFAMILY PP2C-like 70 341 IPR036457 -
Ahy18g2621 375 Gene3D - 52 343 IPR036457 -
Ahy18g2621 375 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 45 361 - -
Ahy18g2621 375 CDD PP2Cc 76 339 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2621 Ahy-Chr18 128750675 128754268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2621 1 375 PP2C-type Phosphatase Gene Family AT2G25620 66.158 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2621 K14803 - gmx:100804558 615.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2621 18 128750675 128754268 Ahy8g2392 8 46484471 46488023 hybridization