Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2605 ATGTCTCAAACTAACTGGGAAGCTGATAAGATGTTAGATGTATATATCCATGATTACCTGGTAAAGAGGGATTTGAAGGCTTCTGCTCAGGCTTTTCAAGCTGAGGGGAAAGTTTCCTCTGACCCTGTTGCTATTGATGCCCCGGGAGGTTTTCTGTTCGAGTGGTGGTCGGTTTTCTGGGACATTTTTATTGCGAGGACTAATGAGAAGCACTCGGAGGTTGCAGCCTCTTATATTGAGACACAACTAATGAAGGCCAGGGAGCAACAGCAGCAGCAACCACAGCAGCCGCAACCGCAGCAGTCGCAGCATCAACAACAGCAGCAGCAACAGCAACACATGCAGATGCAGCAGCTCCTATTGCAGCGGCATGTCCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAACAACAACAACAGCAGCAGCAGCCGCAGCAACCACAACAACAGCAGCCACCTCAGCCACAACCGCAGCAGCAGCAGCAACCACCGCCACAACAACAGCAAGGTAGGGACAGGGCTAATCTCATAAACGGCAATACGAATGGGTTAGTTGGGAACCAGGGAACTGCCAATGCACTAGCAACAAAGATGTATGAGGAGAGGCTAAAGAGAGATTCTTTGGATGAAGCAGCAATGAAGCAAAGATTTGGTGGTGAGAACATGGGTCAAATTTTGGATCCTAATCATGCCTCAATTTTGAAGTCAGCTGCTGCTACTGGCCAGCCTTCAGGGCAAGTTTTGCATGGTGCTACTGCGGCTGGCATGCCTCCACAAGTTCAAGCTCGTAGTCAGCAATTAGCAGGGTCTACTCCAGATATAAAGAGTGAGATTAATCCTGTACTGAACCCTAGAGCTGCGGGTGCTGAAGGATCATTGATGGGAATTCCTGGACCAAATCAAGGTAGTAACAATTTGACTTTGAAGGGATGGCCACTCACAGGTTTGGAGCAACTCCGCTCTGGTCTACTCCAGCAACAAAAGCCTTTCATGCAGGCTCCTCAGCCGTTTCATCAACTTCAAATGTTGACACCACAGCATCAGCAACAGATAATGCTTGCGCAGCAAGGCTTGGCATCTCCATCTGCCAGTGATGACAATAGAAGACTCAGAATGCTGTTGAACAATAGGAGTATGAGCCTAAACAAGGATGGTCTTTCAAATCCTGTTGATGTAGTGCCAAATGTTGGATCTCCACTTCAAGGTGGTGGCCCTCCTTTTCCTCGTGGAGATACAGATATGCTAATGAAGTTGAAATTGGCTCAAATGCAGCAGCAACATCAGCAACAGCCAAACAGCAATCCACAGCTGCAGCAACTTCAACAGCATGCTCTCTCAAATCAGCAATCTCAGACTTCAAGCCATAACATGCATCAGCAAGATAAAGTAGGGGGAGGTGGTGGCAGTGTTACTGCGGACGGTAGCATGTCGAACTCATTTAGAGGCAATGATCAGGCCTCGAAAAACCAGATTGGGAGAAAGAGAAAGCAGCCTGTATCTTCTTCAGGTCCTGCCAATAGTACAGGAACTGCTAATACAACAGGTCCATCACCAAGTTCGGCACCCTCGACTCCCTCGACTCATACACCCGTAGATATGCCGTCTATGACTGGTACTACTTCTTCAAAGCCATTAATGATGTTCAGCACTGACGGCACCGGGACTCTTACATCACCTTCAAACCAATTGGCTGATGTGGATCGCTTTGTGGAGGACGGATCTCTTGATGAAAATGTTGAGTCTTTTTTATCTCATGATGATACGGATCCTAGAGATACGGTCGGTCGTTGTATGGATGTAAGCAAAGGCTTCACATTTTCTGATGTAAATTCTGTACGTGCTAGCACAAGCAAAGTTGTATGTTGTCATTTTTCATCTGATGGGAAATTACTTGCAAGCGGTGGGCACGACAAGAAGGCTGTTTTATGGCACACGGATACCTTGAAGCAGAAGGCTGTTCTTGAAGAGCATTCGTCTATGATCACCGATGTTCGTTTTAGTCCAAGCATGCCTCGTTTAGCAACATCTTCATTTGACAAAACTGTCAGGGTTTGGGACATTGATAATCCTGGTTATTCGCTTCGCACCTTTACAGGACATTCAGCATCTGTAATGTCCCTAGATTTCCATCCAAATAAAGAGGATCTTATCTGCTCTTGTGATGGTGACGGCGAGATACGATATTGGAGCATAAATAATGGAAGTTGTGCAAGAGTCTTCAAGGGTGGCACCGCCCAGATGAGATTTCAACCACGTCTAGGGAGGTACCTGGCTGCAGCTGCAGAGAATGTTGTTTCTATACTTGATGTGGAGACACAAGGATGCCGAAATTCATTAAAGGGCCACACGAAGCCGATACATTCCGTGTGTTGGGACCCTTCCGGGGAGTTGCTGGCATCCGTGAGTGAGGACTCGGTCCGGGTTTGGACTCTAGGAACCGGGAGTGAAGGGGAATGTGTTCATGATCTTAGCAGTAATGGCAGTAAGTTTCAATCATGTGTCTTTCACCCGTCTTATCCGTCGTTGCTCGTCATTGGCTGTTACCAGTCATTGGAGCTGTGGAACATGACGGAGAACAAGACGATGACTCTGACAGCTCACGAAGGTCTCATCGCCTCCCTCGCCGGTTCGACTGTAAATGGTTTGGTTGCTTCGGCGAGTCATGACAAGTTCATCAAGCTCTGGAAGTGA 2703 0.4776 MSQTNWEADKMLDVYIHDYLVKRDLKASAQAFQAEGKVSSDPVAIDAPGGFLFEWWSVFWDIFIARTNEKHSEVAASYIETQLMKAREQQQQQPQQPQPQQSQHQQQQQQQQHMQMQQLLLQRHVQQQQQQQQQQQQQQQQQQQQQQPQQPQQQQPPQPQPQQQQQPPPQQQQGRDRANLINGNTNGLVGNQGTANALATKMYEERLKRDSLDEAAMKQRFGGENMGQILDPNHASILKSAAATGQPSGQVLHGATAAGMPPQVQARSQQLAGSTPDIKSEINPVLNPRAAGAEGSLMGIPGPNQGSNNLTLKGWPLTGLEQLRSGLLQQQKPFMQAPQPFHQLQMLTPQHQQQIMLAQQGLASPSASDDNRRLRMLLNNRSMSLNKDGLSNPVDVVPNVGSPLQGGGPPFPRGDTDMLMKLKLAQMQQQHQQQPNSNPQLQQLQQHALSNQQSQTSSHNMHQQDKVGGGGGSVTADGSMSNSFRGNDQASKNQIGRKRKQPVSSSGPANSTGTANTTGPSPSSAPSTPSTHTPVDMPSMTGTTSSKPLMMFSTDGTGTLTSPSNQLADVDRFVEDGSLDENVESFLSHDDTDPRDTVGRCMDVSKGFTFSDVNSVRASTSKVVCCHFSSDGKLLASGGHDKKAVLWHTDTLKQKAVLEEHSSMITDVRFSPSMPRLATSSFDKTVRVWDIDNPGYSLRTFTGHSASVMSLDFHPNKEDLICSCDGDGEIRYWSINNGSCARVFKGGTAQMRFQPRLGRYLAAAAENVVSILDVETQGCRNSLKGHTKPIHSVCWDPSGELLASVSEDSVRVWTLGTGSEGECVHDLSSNGSKFQSCVFHPSYPSLLVIGCYQSLELWNMTENKTMTLTAHEGLIASLAGSTVNGLVASASHDKFIKLWK* 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2605 900 MobiDBLite consensus disorder prediction 167 192 - -
Ahy18g2605 900 ProSiteProfiles Trp-Asp (WD) repeats profile. 868 900 IPR001680 GO:0005515
Ahy18g2605 900 SUPERFAMILY WD40 repeat-like 614 900 IPR036322 GO:0005515
Ahy18g2605 900 MobiDBLite consensus disorder prediction 152 166 - -
Ahy18g2605 900 ProSitePatterns Trp-Asp (WD) repeats signature. 677 691 IPR019775 -
Ahy18g2605 900 ProSiteProfiles Trp-Asp (WD) repeats profile. 616 657 IPR001680 GO:0005515
Ahy18g2605 900 ProSiteProfiles Trp-Asp (WD) repeats profile. 701 743 IPR001680 GO:0005515
Ahy18g2605 900 ProSiteProfiles Trp-Asp (WD) repeats profile. 658 693 IPR001680 GO:0005515
Ahy18g2605 900 MobiDBLite consensus disorder prediction 425 550 - -
Ahy18g2605 900 Coils Coil 121 147 - -
Ahy18g2605 900 Gene3D - 594 746 IPR015943 GO:0005515
Ahy18g2605 900 PANTHER TRANSCRIPTIONAL COREPRESSOR LEUNIG-LIKE PROTEIN 1 900 - -
Ahy18g2605 900 Pfam WD domain, G-beta repeat 779 813 IPR001680 GO:0005515
Ahy18g2605 900 Pfam WD domain, G-beta repeat 618 647 IPR001680 GO:0005515
Ahy18g2605 900 Pfam WD domain, G-beta repeat 697 734 IPR001680 GO:0005515
Ahy18g2605 900 Pfam WD domain, G-beta repeat 656 690 IPR001680 GO:0005515
Ahy18g2605 900 Pfam WD domain, G-beta repeat 863 900 IPR001680 GO:0005515
Ahy18g2605 900 CDD WD40 616 900 - -
Ahy18g2605 900 SMART Lish 8 40 IPR006594 GO:0005515
Ahy18g2605 900 Pfam LisH 10 36 IPR006594 GO:0005515
Ahy18g2605 900 SMART WD40_4 820 859 IPR001680 GO:0005515
Ahy18g2605 900 SMART WD40_4 776 814 IPR001680 GO:0005515
Ahy18g2605 900 SMART WD40_4 694 734 IPR001680 GO:0005515
Ahy18g2605 900 SMART WD40_4 651 690 IPR001680 GO:0005515
Ahy18g2605 900 SMART WD40_4 737 773 IPR001680 GO:0005515
Ahy18g2605 900 SMART WD40_4 861 900 IPR001680 GO:0005515
Ahy18g2605 900 SMART WD40_4 609 648 IPR001680 GO:0005515
Ahy18g2605 900 MobiDBLite consensus disorder prediction 142 192 - -
Ahy18g2605 900 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 658 693 - -
Ahy18g2605 900 ProSiteProfiles Trp-Asp (WD) repeats profile. 783 823 IPR001680 GO:0005515
Ahy18g2605 900 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 1 900 IPR044716 GO:0003714
Ahy18g2605 900 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 701 739 - -
Ahy18g2605 900 ProSiteProfiles LIS1 homology (LisH) motif profile. 8 40 IPR006594 GO:0005515
Ahy18g2605 900 MobiDBLite consensus disorder prediction 425 464 - -
Ahy18g2605 900 Gene3D - 747 900 IPR015943 GO:0005515
Ahy18g2605 900 MobiDBLite consensus disorder prediction 85 115 - -
Ahy18g2605 900 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 868 900 - -
Ahy18g2605 900 MobiDBLite consensus disorder prediction 475 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2605 Ahy-Chr18 128384093 128392496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2605 695 899 Miscellaneous Gene Families AT5G08390 25.714 2.26e-13 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Ahy18g2605 WD40 0.058 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2605 - - gmx:100816263 1169.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2605 18 128384093 128392496 Ahy18g2605 18 128384093 128392496 ECH
Ahy18g2605 18 128384093 128392496 Ahy8g2379 8 46270606 46278888 hybridization
Ahy16g3073 16 146271644 146281552 Ahy18g2605 18 128384093 128392496 PCT
Ahy6g2392 6 108037743 108046887 Ahy18g2605 18 128384093 128392496 PCT
Ahy18g2605 18 128384093 128392496 Ahy16g3073 16 146271644 146281552 PCT
Ahy18g2605 18 128384093 128392496 Ahy6g2392 6 108037743 108046887 PCT