Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2602 ATGGCACAGCCACAGCCACAGCCACAGCAACACCACCATCATCACAACAACAACAATGGCGGTGGTAGCAGCACCCAAAAACAACAACACCATGTTCTCCATGACTTTCTCGGCATGAAGCCCAACAACGATATACGCCTCTCTACTGACCTCTCACCTTCCTCTTCCTCCGCCGCTGCACGCGGCCCCTTCTCCTCCTCCGCCGCCTCCGACATCGCTTCCGAAAAACAGGTAGGGAATCATCTTGAAGGGGTTCCATACTATGGTCCACGAAGTGATTTTTCTGGCACCGAGATAAGCAACAGATTAGTGGGAAACAAGAGAAGCAATTCTGATTCTACTTTTATGGGTTCCTCCAGAGATGCCTTCCAAATGGTCCCTGATTCCTTTCAAAACTCTCATTTGATGAAGGTCCTTCGTAGTGCTGCCGGAGGAGAGAAGCTTAGAAGGCCAAATGATGACGAAGTGTTGCTCGGTATGCAGTCGCTGAAGCCAATGTCTGCTTCTCTATTTCAGCCTCCTACAAATTCCAAGCTTGATGCCAATAAATGGGAACGATCTTTACTCATGAATGTTGGCCCTTCCATGCAGCATCCCCCGCGTGGAGGTCAACTGACGCCGTTTGTACACCAAATAGCCTCAAACAAAATGAGGGATGCCAATGCCGGTCCTTCATTTATTTCTCAGTCAGCTGCTGATGAAGGATCTAGAACAGGAATTAAGGGCCCTGGCATTTTAAGTTCCATAAACCCAACTGCTTTGGGCATTGAGAAATCATCATCTGCAGGGTTTCTTGGTGGAAGCAGGACAAAGACTGTAAGTAATGTAGTGGACCCCGAATCATCGGCACTTCCAAGTCAACATGGCCAAAAATCTTCCAGCCGCCAGATGACTATATTTTATGGGGGTCAGGCTCATGTTTTCGATGATGTCCACCCTCACAAGGCAGATGTTATAATGTCTTTAGCCGGGTCAAATGGCGGATCATGGTCAACAGCATTCTCACCAAAATCTTCTGTAAAGCTGGCAAATGATAGTAACTTGCACAGCGGAGAGAACGACACGGGTATCCCACATGATCTTCACGGGAGGTTGCCCATTACTGGAAGTTCTAGCCATGCCATTGTGCCTGGTGATCGAATATCTACTCCGGCAGTTGTAGTGGCAAACCAGGGAAGCATTGTATCTAAACATACAAGAAATCCTGTTCAAGCATCTGAACCCAGATCTGAAGACAAAAAAAGAGCACAATGA 1254 0.4761 MAQPQPQPQQHHHHHNNNNGGGSSTQKQQHHVLHDFLGMKPNNDIRLSTDLSPSSSSAAARGPFSSSAASDIASEKQVGNHLEGVPYYGPRSDFSGTEISNRLVGNKRSNSDSTFMGSSRDAFQMVPDSFQNSHLMKVLRSAAGGEKLRRPNDDEVLLGMQSLKPMSASLFQPPTNSKLDANKWERSLLMNVGPSMQHPPRGGQLTPFVHQIASNKMRDANAGPSFISQSAADEGSRTGIKGPGILSSINPTALGIEKSSSAGFLGGSRTKTVSNVVDPESSALPSQHGQKSSSRQMTIFYGGQAHVFDDVHPHKADVIMSLAGSNGGSWSTAFSPKSSVKLANDSNLHSGENDTGIPHDLHGRLPITGSSSHAIVPGDRISTPAVVVANQGSIVSKHTRNPVQASEPRSEDKKRAQ* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2602 417 MobiDBLite consensus disorder prediction 1 72 - -
Ahy18g2602 417 MobiDBLite consensus disorder prediction 1 31 - -
Ahy18g2602 417 PANTHER PROTEIN TIFY 8 61 414 - -
Ahy18g2602 417 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 61 414 IPR040390 -
Ahy18g2602 417 ProSiteProfiles Tify domain profile. 290 325 IPR010399 -
Ahy18g2602 417 MobiDBLite consensus disorder prediction 344 376 - -
Ahy18g2602 417 Pfam tify domain 292 324 IPR010399 -
Ahy18g2602 417 MobiDBLite consensus disorder prediction 45 72 - -
Ahy18g2602 417 MobiDBLite consensus disorder prediction 392 417 - -
Ahy18g2602 417 SMART tify_2 290 325 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2602 Ahy-Chr18 128297490 128304660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2602 27 323 Tify Gene Family AT4G32570 38.994 9.62e-49 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Ahy18g2602 tify 1.00E-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2602 - - ahf:112707837 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2602 18 128297490 128304660 Ahy18g2602 18 128297490 128304660 ECH
Ahy18g2602 18 128297490 128304660 Ahy8g2376 8 46225704 46232533 hybridization