Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2601 ATGAACAAAGCAAATAAAGCAGCCAGTGCCAAAGACGAAGAGCGTCCACATCGAATCACAAGAGCGAGGGCTAAGGTCTTAGGATCAGTTGGAGGGATACCACCCTACTCAAGACCATCATTTAAAAATGAGCAGAAACATGTACTTAGAGGAAGTTTCACAAGAACAGGTTCTGATGAGAACAAAACTTCTGTAGTTATTGATCCCCTGGATAAGAGAAAACAAGTGCTTAATGATGTAACTAACATCTGTAGTAATGCTTCAACATTTCAGGCAAGAAGAGTTAATAAGAAGAAAAACACAAAGCTGGCATCAAATGTCTCATTTGAAGTTTCAACATCACAAGGGGATGTTAGAGCAAAGTTAACTAAAGAAGTATCCACAATAAGGGTGGTAGAATCACATGACACCACTGGTGAACATTGTATGTCCAATAGCATAAGAGAACATGGTATCACAGACAACGTGCTTTCGGTGCAAGACACTGCGAAATCTGATGGTCCGAGCTCTCCAAATAAAGACATAGATATGATTTGTGAGAAACTAGGAGCATCAGATTGCTTGGCCATTGTGGACATTGATTCCGAGATAAAGGATCCTGAAGTTTGGAGTTCTTATGCACCTGAAATATACAATAATATTCGTGTCACAGAGCTCTCAAGGAGACCAATATCGAATTACATGGGAGAGTTGCAGCAAGATATCAGTCCTACCATGAGGGGAATTTTGATTGATTGGCTTGTGGAGGTTACCGAGGAATATAACTTGGTTCCAGACACACTTTACCTTACAGTAAACCTCATTGATAGGTATCTCTCAGCAAAATTGATGCAGAAACAAAGACTCCAGTTGCTTGGTGTTACTTGCATGCTCATTGCATCAAAGTATGAAGAGATTTGTGCTCCTAGAGTGGAGGAATTTTGCTTCATCACAGATAACACTTACACAAAAGAAGAGGTATTGAAAATGGAGAGTGAAGTTCTAAACATTTTGCATTTTCATTTATCTGTTCCAACAACCAAAACATTTCTGAGGAGATTCATCCAAGCGGCACAATCTTCATACAAGGTCCCTCACATTGAATTGGAATTCCTGGCAAATTATTTAGCAGAGCTTACCCTTGTTGAGTACAGTTTCTTGCAGTTTCTACCTTCCCTTATAGCTGCATCTGCTGTGTTCCTTGCAAGATGGACTTTAAACCAATCAGAACATCCATGGAATCTAACCCTGGAGCACTATACAAATTACAAAGCTTCAGAGCTTGAAACTGTTGTTCTTGCACTTGTAGATTTGCAGCTCAACACCAAAGCTAGTTCCCTAAATGCTATACGTGAAAAGTATAAACAACATAAGTTCAATTGTGTGGCAACACTGTCTCCAAATCCAAAACCTGTGCAATCGCTCTTCCAAGTTCAAGTGTAA 1422 0.3966 MNKANKAASAKDEERPHRITRARAKVLGSVGGIPPYSRPSFKNEQKHVLRGSFTRTGSDENKTSVVIDPLDKRKQVLNDVTNICSNASTFQARRVNKKKNTKLASNVSFEVSTSQGDVRAKLTKEVSTIRVVESHDTTGEHCMSNSIREHGITDNVLSVQDTAKSDGPSSPNKDIDMICEKLGASDCLAIVDIDSEIKDPEVWSSYAPEIYNNIRVTELSRRPISNYMGELQQDISPTMRGILIDWLVEVTEEYNLVPDTLYLTVNLIDRYLSAKLMQKQRLQLLGVTCMLIASKYEEICAPRVEEFCFITDNTYTKEEVLKMESEVLNILHFHLSVPTTKTFLRRFIQAAQSSYKVPHIELEFLANYLAELTLVEYSFLQFLPSLIAASAVFLARWTLNQSEHPWNLTLEHYTNYKASELETVVLALVDLQLNTKASSLNAIREKYKQHKFNCVATLSPNPKPVQSLFQVQV* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2601 473 SMART cyclin_7 342 430 IPR013763 -
Ahy18g2601 473 SMART cyclin_7 245 329 IPR013763 -
Ahy18g2601 473 Gene3D - 209 457 - -
Ahy18g2601 473 CDD CYCLIN 239 328 IPR013763 -
Ahy18g2601 473 Pfam Cyclin, C-terminal domain 338 460 IPR004367 -
Ahy18g2601 473 PANTHER CYCLINS 51 469 IPR039361 -
Ahy18g2601 473 PIRSF Cyclin_A_B_D_E 38 472 IPR039361 -
Ahy18g2601 473 SMART Cyclin_C_2 338 461 IPR004367 -
Ahy18g2601 473 MobiDBLite consensus disorder prediction 1 41 - -
Ahy18g2601 473 Gene3D - 223 336 - -
Ahy18g2601 473 PANTHER CYCLIN-A2-4 51 469 - -
Ahy18g2601 473 SUPERFAMILY Cyclin-like 199 335 IPR036915 -
Ahy18g2601 473 SUPERFAMILY Cyclin-like 337 460 IPR036915 -
Ahy18g2601 473 MobiDBLite consensus disorder prediction 1 21 - -
Ahy18g2601 473 ProSitePatterns Cyclins signature. 240 271 IPR006671 -
Ahy18g2601 473 CDD CYCLIN 336 429 IPR013763 -
Ahy18g2601 473 Pfam Cyclin, N-terminal domain 209 335 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2601 Ahy-Chr18 128232950 128242911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2601 18 469 Core Cell Cycle Gene Families AT5G25380 53.611 8.53e-155 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2601 K06627 - gmx:547780 634.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2601 18 128232950 128242911 Ahy18g2601 18 128232950 128242911 ECH
Ahy18g2601 18 128232950 128242911 Ahy8g2368 8 46118013 46126665 hybridization