Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2574 ATGTTGCCATTTGTAGCTAGAAGTAGTTCTAGGAGCGAAATAAACCACTTCGCCTCAGTTCCCAGCAGCCTCTTACCAGCATTTGGCACCAACTTTGATGAAGGGTATTTGAACCTTAGAAAATATGTAATAGCTCCGTATAACCGAAGATATCGGTTGTGGCAAACGTTCTTAGTTGCATTGGTGGTTTACTCTGCATGGGCATCTCCATTCGAGCTAGCCTTCAGAGAACTGTCAATTGGGTCGCTGGTGCCAGTTGATATCATTGTGGATGGCTTCTTTGCCATTGATATTATCCTTACTTTCTTTGTGGCTTATTTGGATAGATCAACTTATCTCCTCGTTGATGACCATAAGAAGATTGCTATAAGATATATTAAAATGTTACACTTCCCAATGGATCTAGCATCCACTCTCCCTTTCGACCAGATATACCAAATTCTGACAGGCAAACGACACGGGCCCGAGATCTTTGGTTTCCTAAATATGCTTAGACTATGGCGACTGAGACATGTTAGCGAATTCTTCTCAAGGCTAGAGAAAGACATACGAATTAGCTACACTGCAACAAGATTTTGTAAACTTATATGTGTTACGCTATTTGCAGTTCACTTCGCAGGCTGCATGTATTTTTGGTTGGCTTTCCATCACAAAACACCCGAAAATACATGGCTCCACAAGGAACTACCGGATTTTAAATATAGGAGTGTCTGGTTGTGTTACATCTATTCCATGTACTGGTCTATAACAACTCTTACCACTGTTGGCTATGGAGATCTGTATGCAGTGAATACAGAGGAGAAGGTTTACAGTAGTTTATTTATGCTGTTCAACATAGGCCTCACGGCATATATAATCGGAAACATGACTAATCTGGCAGTTCATAACACCGTCCGAACCTTTGCAATGAGGGATGCCTTTAACAGAGTGTTACGATATGCAAGCAAAAGTAGACTCCCAAAACGTTTGAAAGAACAAATGTTGGCGCATAAAGAATTGAAACTTAAGATGGAAGAGTCACAGCAACAAGAAGTGCTACAGGACATCCCTAAAGCAATTAGATCCAGTATTGCTCAACATCTTTTCAGCAATGTAGTTGATAAAGCATATTTATTTAAAGGAGTCTCTGATGAGTGTATCATTCAGCTGGCGTCAGACATGAAAGCAGAATACTACCTACCTAAGGTTGACATTATCTTGCAAAATGAGATGCCAATATATTTCTACATTCTGGTATATGGATCACTGGATCTATTTATACACAAGAATGGAAGCGAACAGCTTTTGTTTGAATTAGAACCTGGAGGCATGGCTGGAGAAATCGGCGGGATGTTTAATATTCCACAACCTTTTACAGTTAGAACTAGGAGGCTCTCCCAGGTCATACGAATCAACCAACATCAGTTCAAGCAGATGATGCAACCATTTAATAATGATGGGAAACAAATCATCAACAACTTCATTAAGTACTTGAGGGAACAAAGAGGCAGCGTGCTAGAAGAAATACCATACTTATCAGAATTACTAGGAGACCTGTATCTCGAGCATATAACACAAAATGGGGACTCACACGATGAAGTTTCAAGATATCACGATGATGGACCATGTAAAGAAGGAAGGACTATAAATTCCGATCCACGGTCAAGCCCAGCTTCCACTAGAGTAATAATCCATGGTCATCATCCCAATGAAAAGAAAATGGGAAAAGGAGACACGAAAAAGCTCATACTTCTCCCGAGCTCAATAGAAGAGCTTTTCAGAGTAGCAGAGAAAAAGTTCGGTAAAAGAGCGAGAAAAATTCTTATGGCGGATGGCTCAGAAGTAGAAGAAATAAACGTCTTAAGAGATCATGACGAGTTATACATCTTCTAA 1872 0.4006 MLPFVARSSSRSEINHFASVPSSLLPAFGTNFDEGYLNLRKYVIAPYNRRYRLWQTFLVALVVYSAWASPFELAFRELSIGSLVPVDIIVDGFFAIDIILTFFVAYLDRSTYLLVDDHKKIAIRYIKMLHFPMDLASTLPFDQIYQILTGKRHGPEIFGFLNMLRLWRLRHVSEFFSRLEKDIRISYTATRFCKLICVTLFAVHFAGCMYFWLAFHHKTPENTWLHKELPDFKYRSVWLCYIYSMYWSITTLTTVGYGDLYAVNTEEKVYSSLFMLFNIGLTAYIIGNMTNLAVHNTVRTFAMRDAFNRVLRYASKSRLPKRLKEQMLAHKELKLKMEESQQQEVLQDIPKAIRSSIAQHLFSNVVDKAYLFKGVSDECIIQLASDMKAEYYLPKVDIILQNEMPIYFYILVYGSLDLFIHKNGSEQLLFELEPGGMAGEIGGMFNIPQPFTVRTRRLSQVIRINQHQFKQMMQPFNNDGKQIINNFIKYLREQRGSVLEEIPYLSELLGDLYLEHITQNGDSHDEVSRYHDDGPCKEGRTINSDPRSSPASTRVIIHGHHPNEKKMGKGDTKKLILLPSSIEELFRVAEKKFGKRARKILMADGSEVEEINVLRDHDELYIF* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2574 623 Pfam KHA, dimerisation domain of potassium ion channel 554 622 IPR021789 -
Ahy18g2574 623 PRINTS EAG/ELK/ERG potassium channel family signature 267 278 IPR003938 GO:0005249|GO:0006813|GO:0016020
Ahy18g2574 623 PRINTS EAG/ELK/ERG potassium channel family signature 98 107 IPR003938 GO:0005249|GO:0006813|GO:0016020
Ahy18g2574 623 PRINTS EAG/ELK/ERG potassium channel family signature 285 294 IPR003938 GO:0005249|GO:0006813|GO:0016020
Ahy18g2574 623 PRINTS EAG/ELK/ERG potassium channel family signature 87 97 IPR003938 GO:0005249|GO:0006813|GO:0016020
Ahy18g2574 623 PRINTS EAG/ELK/ERG potassium channel family signature 241 258 IPR003938 GO:0005249|GO:0006813|GO:0016020
Ahy18g2574 623 Coils Coil 323 343 - -
Ahy18g2574 623 Pfam Cyclic nucleotide-binding domain 397 474 IPR000595 -
Ahy18g2574 623 ProSiteProfiles KHA domain profile. 554 623 IPR021789 -
Ahy18g2574 623 PANTHER POTASSIUM CHANNEL AKT1 22 623 IPR045319 GO:0005249|GO:0006813
Ahy18g2574 623 Gene3D - 52 294 - -
Ahy18g2574 623 ProSiteProfiles cAMP/cGMP binding motif profile. 371 490 IPR000595 -
Ahy18g2574 623 SUPERFAMILY cAMP-binding domain-like 300 492 IPR018490 -
Ahy18g2574 623 PANTHER POTASSIUM CHANNEL KAT3 22 623 - -
Ahy18g2574 623 CDD CAP_ED 371 484 IPR000595 -
Ahy18g2574 623 SUPERFAMILY Voltage-gated potassium channels 46 292 - -
Ahy18g2574 623 Pfam Ion transport protein 52 293 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Ahy18g2574 623 SMART cnmp_10 371 488 IPR000595 -
Ahy18g2574 623 Gene3D Jelly Rolls 337 496 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2574 Ahy-Chr18 127628986 127635189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2574 7 623 Ion Channels AT4G32650 54.019 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2574 K21867 - gmx:100794620 868.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2574 18 127628986 127635189 Ahy18g2574 18 127628986 127635189 ECH
Ahy18g2574 18 127628986 127635189 Ahy8g2349 8 45877349 45883086 hybridization