Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2561 ATGAAGAGGTCTCCTAATTCCTCTTCTTCATCTTCATCATCTTCTATCGGTGCTGATTTTGAATTAAAGATTAATAATAATGATAAGTATCCAAGAAGCAAAAATAGCAGTAATAATGTGAAGTTATCACAGAATAAAGTATTGAAGAAAACAAATAGCTATGACAATAGCAGTGTCAACAAAAGAAGCTCCATTTACAGAGGAGTCACCAGGCATAGGTGGACAGGGAGGTTTGAAGCTCATCTGTGGGACAAGAATTCTTGGAATAATATCCAGAGTAAGAAGGGACGACAAGGGGCATATAATACAGAAGAAGCTGCTGCTCGCTCCTATGATCTTGCTGCTCTAAAGTATTGGGGACCTAATACAATCTTAAATTTTCCGATGGAAACATATGCCAAGGAAATTGAGGAAATGAAGGATGTTTCACAAACTGAATACTTGGCTTCTCTGCGAAGAAGGAGCAGTGGATTTTCAAGAGGTGTTTCCAAGTATCGTGGAGTGGCTAGGCATCACCACAATGGAAGGTGGGAAGCACGAATTGGAAGAGTAAATGGCAACAAGTACCTTTATCTGGGGACCTATAACACTCAAGAAGAGGCGGCAGCAGCATATGATAGAGCAGCTATAGAGTACAGAGGAATAAATGCAGTAACAAATTTTGATATAAGCAATTATATTGACAAAATAAAGAAGAATGAGCCGTCTATGAAAGAAGCACAAACACATATAACTCCAATCTCTACTGAATCTAAAGAAGCAGAAGTAGTAGTGGAGCAGGAGGCTCCTTCCACAGTAGTGGCAGATCCAGCAAATTCAGAAAATATGCAGAAGAAAAAAGAGCAGCCAAACACAAATATCGACGGCATACTTTCTCGGGATCTGAGATGGAGCTTCATGGATGCCGAATTATCCGAGTTCAACATGAATGATATTTTTCAAGGTGAAGGTAGTGGGTTGGAAGATGACATCAACCTTATGTGTATGGCTGATCCTGATGAGAGTAGTTTCAATCTGAACACTATCTTTGATGGTCCTGAAAAATGTGGTGGAGATATGCATGTCTATGCCAATTATTAA 1080 0.3944 MKRSPNSSSSSSSSSIGADFELKINNNDKYPRSKNSSNNVKLSQNKVLKKTNSYDNSSVNKRSSIYRGVTRHRWTGRFEAHLWDKNSWNNIQSKKGRQGAYNTEEAAARSYDLAALKYWGPNTILNFPMETYAKEIEEMKDVSQTEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVNGNKYLYLGTYNTQEEAAAAYDRAAIEYRGINAVTNFDISNYIDKIKKNEPSMKEAQTHITPISTESKEAEVVVEQEAPSTVVADPANSENMQKKKEQPNTNIDGILSRDLRWSFMDAELSEFNMNDIFQGEGSGLEDDINLMCMADPDESSFNLNTIFDGPEKCGGDMHVYANY* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2561 359 Pfam AP2 domain 65 120 IPR001471 GO:0003700|GO:0006355
Ahy18g2561 359 Pfam AP2 domain 163 214 IPR001471 GO:0003700|GO:0006355
Ahy18g2561 359 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR WRI1 1 293 - -
Ahy18g2561 359 CDD AP2 163 224 IPR001471 GO:0003700|GO:0006355
Ahy18g2561 359 SMART rav1_2 164 228 IPR001471 GO:0003700|GO:0006355
Ahy18g2561 359 SMART rav1_2 65 134 IPR001471 GO:0003700|GO:0006355
Ahy18g2561 359 CDD AP2 64 128 IPR001471 GO:0003700|GO:0006355
Ahy18g2561 359 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 293 - -
Ahy18g2561 359 PRINTS Ethylene responsive element binding protein signature 66 77 IPR001471 GO:0003700|GO:0006355
Ahy18g2561 359 PRINTS Ethylene responsive element binding protein signature 204 224 IPR001471 GO:0003700|GO:0006355
Ahy18g2561 359 Gene3D AP2/ERF domain 163 224 IPR036955 GO:0003700|GO:0006355
Ahy18g2561 359 Gene3D AP2/ERF domain 65 130 IPR036955 GO:0003700|GO:0006355
Ahy18g2561 359 ProSiteProfiles AP2/ERF domain profile. 65 128 IPR001471 GO:0003700|GO:0006355
Ahy18g2561 359 MobiDBLite consensus disorder prediction 261 286 - -
Ahy18g2561 359 SUPERFAMILY DNA-binding domain 64 130 IPR016177 GO:0003677
Ahy18g2561 359 ProSiteProfiles AP2/ERF domain profile. 164 222 IPR001471 GO:0003700|GO:0006355
Ahy18g2561 359 MobiDBLite consensus disorder prediction 266 286 - -
Ahy18g2561 359 MobiDBLite consensus disorder prediction 29 59 - -
Ahy18g2561 359 MobiDBLite consensus disorder prediction 23 59 - -
Ahy18g2561 359 SUPERFAMILY DNA-binding domain 163 224 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2561 Ahy-Chr18 127403896 127414761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2561 158 232 AP2-EREBP Transcription Factor Family AT5G57390 39.759 2.11e-11 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Ahy18g2561 AP2 6.50E-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2561 - - adu:107463124 669.463