Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2480 ATGGGTGATGTTGTCACCAAGAAATACAAGATGGAGGAGCTAAATGATGATGATTCCTTGGAACTCTTTTGTTGGCATGCTTTCAACAGCAAGGAGCCTGCAGAGAACTTTGAAAATGTTTCAAGAAATGCAATAAGTTATGCAAAGGGCTTTCCACTTGCTTTAGAAGTAATAGGCTCCCATTTAGGGGGTTTTACAAAAACTTACTTGGACATTGCTTGTTTCTTCAAAGGAGAGAAATGGGAGTATGTTAAAAGGGTATTGAAAGCTTGCGACTTCTATCCAGTTCTTCGAGTGTTCATTAGTAAATGTCTTGTCACTGTAAATCAAAATGGCTGCTTGGAAATGCATGATCTAGTGCAAGACATGGGCAAGGAGATTGTAATGAGCGAGTCGCCAACAAACCCGGGTGAACGTAGCAGATTATGGTCTCCCAAGGACATTCTTCAAGTACTCAAAGATGACACAGTAAGAAGAAGTGTTGATCCTGTGCTTGTGTTTTATCGGGAAGTAGCTCAATTGAAGGAATAA 531 0.403 MGDVVTKKYKMEELNDDDSLELFCWHAFNSKEPAENFENVSRNAISYAKGFPLALEVIGSHLGGFTKTYLDIACFFKGEKWEYVKRVLKACDFYPVLRVFISKCLVTVNQNGCLEMHDLVQDMGKEIVMSESPTNPGERSRLWSPKDILQVLKDDTVRRSVDPVLVFYREVAQLKE* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2480 176 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 67 163 IPR044974 GO:0006952
Ahy18g2480 176 SUPERFAMILY "Winged helix" DNA-binding domain 67 153 IPR036390 -
Ahy18g2480 176 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 91 IPR027417 -
Ahy18g2480 176 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 8 60 - -
Ahy18g2480 176 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 67 163 - -
Ahy18g2480 176 Gene3D - 13 105 IPR042197 -
Ahy18g2480 176 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 60 IPR044974 GO:0006952
Ahy18g2480 176 Pfam NB-ARC domain 6 62 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2480 Ahy-Chr18 125956648 125957368 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2480 5 176 WRKY Transcription Factor Family AT5G45050 31.905 1.21e-23 95.1