Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2460 ATGAGTGTTGTGTATAGTCATGCTCTAAAATACTCTCAAGAAATGGATTCAAACAACACTAATTCTGGATTATTAAGGTACCGGTCTGCTCCAAGCTCAATGCTCACAAGCCTTATGGATAACATCCACCACGGCGGCGGCGGCGGTGGCGGCGGCGGCGGCGGTGGCGGCGACGAAGAAGCCTTGAGAACTGAATTGGAAAAGTTGATCTCATCCAACAACAAAAACAAACGTGTTGTGAACAATTCTTCAGAGCATTTGAAGAGAGAAGAAGGCAACAACAATTGTAATTACTCTTTTGGGTCTCAGAATCATGTTATTTACCAAAACAACCAGCACTACCATCAAATTCATCAAGGGTTGGCAATGGCATCATCATGTAATAATGGTTTTGATGGAACATTATTTGGTGCAACGAACTCAATGGATTCAGAGAATAATAATGATAATGGCACACAAAATAAAATGGGTTCCAATCTCGTTAGGCAAAAGAGTTCTCCAGCTGGTTTTTTCTCCAATTATTCAATTGATAATAATGGTACAACAACATCATCAAGAAGTAGTAGTGGATTGCAATGCACTTTGAACTTCTCATCAAGATCATCCTCTTGCTCCAAAAGCCGCATGCCAAAAATTGTTGAGAGTGGAAATGAAGGCATGGAATCAAATTGTGTTGAAAATAGAAACCTAATAATAAGGAATGATGATAGTAATAATAATAATAATAATGGCAGTACTAAGTGTTATATGCCAAGATTCACTGGTGACTTTTGGGATGCTTCTGAATTCAATTCCTCCAAAAGAGGCACTAACAATGGTGAAATCATGTTTTCCACTTCAAATGCCATGGAAGCTCAGGATGTAGATTTTGGATATCAAAAGGTTGGTTTGACCCACCATTTAAGTCTACCTAGTTCTTCTACCAAGATTGGTGGCATGGAAAAGCTTTTTCAAATTCAAGGATCTGCTCCATGTAAGATTAGAGCCAAAAGAGGATTTGCCACTCACCCAAGAAGCATTGCAGAGAGGGAAAGAAGAACAAGAATAAGTGCCAGAATCAAGAAACTCCAAGACCTTTTCCCAAAATCGGACAAGCAAACAAGTACTGCAGATATGTTGGATTTGGCAGTTGATTATATCAAAGGCCTTCAGAAACAAGTCAAGATACTCACAGATACAAGGGCAAAGTGCAACTGTTCAAGTAATAATCAGAAAGAACAATAA 1224 0.3897 MSVVYSHALKYSQEMDSNNTNSGLLRYRSAPSSMLTSLMDNIHHGGGGGGGGGGGGGDEEALRTELEKLISSNNKNKRVVNNSSEHLKREEGNNNCNYSFGSQNHVIYQNNQHYHQIHQGLAMASSCNNGFDGTLFGATNSMDSENNNDNGTQNKMGSNLVRQKSSPAGFFSNYSIDNNGTTTSSRSSSGLQCTLNFSSRSSSCSKSRMPKIVESGNEGMESNCVENRNLIIRNDDSNNNNNNGSTKCYMPRFTGDFWDASEFNSSKRGTNNGEIMFSTSNAMEAQDVDFGYQKVGLTHHLSLPSSSTKIGGMEKLFQIQGSAPCKIRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKSDKQTSTADMLDLAVDYIKGLQKQVKILTDTRAKCNCSSNNQKEQ* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2460 407 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 333 383 IPR011598 GO:0046983
Ahy18g2460 407 MobiDBLite consensus disorder prediction 38 60 - -
Ahy18g2460 407 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 16 403 - -
Ahy18g2460 407 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 16 403 - -
Ahy18g2460 407 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 336 398 IPR036638 GO:0046983
Ahy18g2460 407 Gene3D - 335 406 IPR036638 GO:0046983
Ahy18g2460 407 Pfam Helix-loop-helix DNA-binding domain 339 384 IPR011598 GO:0046983
Ahy18g2460 407 SMART finulus 339 389 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2460 Ahy-Chr18 125573510 125577625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2460 16 389 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 34.901 6.66e-44 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy18g2460 HLH 3.50E-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2460 - - gmx:100795896 384.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2460 18 125573510 125577625 Ahy18g2460 18 125573510 125577625 ECH
Ahy18g2460 18 125573510 125577625 Ahy8g2029 8 40449539 40452905 hybridization