Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2441 ATGAGGAAACCGGATAATAATATGGGGAAGGACAAAATGGGAAATAACAACACTATTATTAAGAGCAAGCTTAGAAAGGGTTTGTGGTCACCTGAGGAAGATGAGAAGCTATTAAGGTACATGCTCACAAATGGACAAGGTTGTTGGACCGACATTGCTAGGAATGCCGGCCTCCAACGGTGCGGCAAGAGTTGCCGCCTCCGTTGGATTAACTACCTAAGGCCGGACCTTAAGCGCGGCGCTTTTTCGCCGCAAGAAGAAGATCTCATTGTTCATTTGCATTCCATTCTTGGCAACAGGTGGTCTCAGATAGCAGCACGTTTACCTGGGCGTACAGACAATGAGATAAAGAATTTCTGGAACTCCACACTCAAGAAAAGATTCAAACTTAGCACCAATAACACCCCATCACCAAACAACAATAGTAGCAGTGATGACTCTTCATCAGATCCTAATAATGCTAATGGAATCATCATGGTGCACCTCAATGAACAACAACATGATCTCATGCCCATGTCAATGTGCATGGACTCATCATATTCTTCTTCATCAACTTCTTCATCAATCTCATCCATGCATCAACAACAAGCAGCACCAATGGTTTTTTCTGACCAATATAATGACCCATTTTCTATCTTGATAAATAATAATGATGTGCCTCAATGCTTGATGACCCAATTTGGTGGCATGGTAGAGGAGGGGCATAATGGGAATTATGGAATTATGGGGTCTAACAATAAAATAGGGCTAGAAAGAGAGTTGTCACTTCCTCCACTAGAAAGTGACAATAATGCCCCTATTATTGATGTGAAAAACCATAACAACCATTTCAATCATCATCATCATAGTGGTTGCTTCAATAATGCTCATCAGAAGGTTTCCAAGGTGGAGGAATTGTTTGGGTTTGGAAATAATAACAATAATGATCATCATGGGCATCAGCAATTGCATCAAGGGGAAAACTTGAAAATTGGAGAATGGGATTTGGAGGGTCTCATGCAAGATATGTCCTCTTTCCCTTTTCTTGATTTTCAAGTTGAATAA 1044 0.408 MRKPDNNMGKDKMGNNNTIIKSKLRKGLWSPEEDEKLLRYMLTNGQGCWTDIARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEDLIVHLHSILGNRWSQIAARLPGRTDNEIKNFWNSTLKKRFKLSTNNTPSPNNNSSSDDSSSDPNNANGIIMVHLNEQQHDLMPMSMCMDSSYSSSSTSSSISSMHQQQAAPMVFSDQYNDPFSILINNNDVPQCLMTQFGGMVEEGHNGNYGIMGSNNKIGLERELSLPPLESDNNAPIIDVKNHNNHFNHHHHSGCFNNAHQKVSKVEELFGFGNNNNNDHHGHQQLHQGENLKIGEWDLEGLMQDMSSFPFLDFQVE* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2441 347 Gene3D - 23 79 - -
Ahy18g2441 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 128 IPR017930 -
Ahy18g2441 347 CDD SANT 81 124 IPR001005 -
Ahy18g2441 347 PANTHER TRANSCRIPTION FACTOR MYB83 1 347 - -
Ahy18g2441 347 SUPERFAMILY Homeodomain-like 24 120 IPR009057 -
Ahy18g2441 347 SMART sant 78 126 IPR001005 -
Ahy18g2441 347 SMART sant 25 75 IPR001005 -
Ahy18g2441 347 ProSiteProfiles Myb-like domain profile. 21 73 IPR001005 -
Ahy18g2441 347 CDD SANT 29 73 IPR001005 -
Ahy18g2441 347 MobiDBLite consensus disorder prediction 130 155 - -
Ahy18g2441 347 PANTHER MYB DOMAIN PROTEIN 55 1 347 - -
Ahy18g2441 347 Pfam Myb-like DNA-binding domain 79 123 IPR001005 -
Ahy18g2441 347 Pfam Myb-like DNA-binding domain 26 73 IPR001005 -
Ahy18g2441 347 Gene3D - 80 153 - -
Ahy18g2441 347 ProSiteProfiles Myb-like domain profile. 74 124 IPR001005 -
Ahy18g2441 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 73 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2441 Ahy-Chr18 125062455 125067060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2441 1 347 MYB Transcription Factor Family AT3G08500 48.118 1.75e-84 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy18g2441 Myb_DNA-bind_6 1.10E-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2441 K09422 - qsu:112038777 332.028