Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2428 ATGTCTGACAGAGCAGAGCACGGAGTTGGATCGTTTGAGGGCGAAGGCTCTGCACGGATGGAGTCGGACAAGTACGACTTTCAGGAAGATGAAACAGAACACGACCATCATGCAGAGGCCGATGTCGACAATGGGGATGCGGTTGAATTGGAAGACAGTTTGGACGGCGCCGGAGGAATGTCTGACAATTATGCGGAAGACGAGTTTTACGCTGTTGATTCCGTGGAGTCGATAGGTTGGATTGATTTTTTGAACTTGAGCGAGGAGGATGTTTTCCGGTTTAATTTCACAGACGTTGACATTGCATTTGAGTTCTACCAGCAATATGCAAAGCACCATGGCTTCGGGGCGAGACGTTCCAGAAGCGAAAAACGCGGCGAAGTAAGGATACGGCAGGAGTTCGTGTGCCACCGACAAGGGTACCGATCCCCGAAGTTCTACTCGATGCCTAACGGGCAAAAGAGGCCGAGGGCCGAGACACGTTGTGGATGCCCTGCAAGGATGCTACTCCGCATGGACGATGAATCAGGACGTTGGCTCGTTGCGTACTTTTCAGACGCGCATAACCACCACGTTCTTGAGTTGCGACTTTCTTCCATGCTTCCAGGCCATCGGAGGATGAGTGAAGCGGACATCGAGCAGATGAACGACATGCGCAAAGGGGGCATTGGCGTCTCCCGAATCCACGGTTTTATGGCGAGCCTAGCCGGCGGGTATCATAATGTCCTGTACACAACAAGGGACATGCACAATGTAAATGCGAAGCAACTAAGGGAGGGTGGCCTAGATGCGGAATCGTGCCTAAGGTATCTCCGAGAGTGCAAGACAAATGATCCAGCACTGTACTACAAGGAAGTTGTTGACGGTGAGGGCGTGTTGCAACATTTGTTTTGGTGTGACGGCACCAGCCAAATTGATTACCAGGTGTTTGGAGACGTGGTTACATTTGATGCAACGTACAAGAAAAATGTTTACCTTTCACCTCTTGTAGTATTCTCCGGTGTGAATCACCACAACCAAACGGTTGTCTTTGCCGCCGCACTGGTGGCAGACGAGAAAGAAGAGACCTATGTCTGGCTGCTTCAACAGTTGCAAACTTTAATGAAAGGGAAGGCTCCCGTGTCCATAATAACCGACGGTGACAGGCAAATGAAGTCTGTGATCAAGCAGGTTTTTTCGGAGGCTCACCATCGACTCTGCGCTTGGCATCTACTCCGAAACGCCACGAGCAACATCGGAAAGCCCAAATTCACCAGGATGTTTAGGGATTGCATGCTTGGCGACTACGAGGTCCGAACATTCGAGAGAAAGTGGTTTGAGATGGTTGAGAAATTTGGCGTCGCCGATAAAAGATGGGTACAGGACATGTACGAGAGAAGGCACAGTTGGGCCACAGCACACATACGGAGAAAGTTCTTTGCCGGATTTCGAACAACGTCAAGCTACACTGAGTTTTTACGTCATTTCCAGCGATGCTTGATGTTCGTGCGTGCAAAGGAGGTGGAGGCTGATTTCGAGTGTGCAAAGGGTGACCCTGTTATGACCACCAACCTGAAACAGCTGGAGCGGAGTGCAGCCGAGAACTACACTCGTGCAATATTCTATTTGTTTGTTCCCATTCTTGACAGGGCTTGTGCAATGAGGGTGGTTGACTCTGAAGACAACGGTTCCTATTTTATCCACATCGTCTCTCGATACGGCACTCCGGGGAAGGATTGGCGTGTTGTTGCAACGTTTAATACGAGGGAGGTTCGATGCACGTGCATGAGAATGGAATGTTTCGGGGTCCCCTGCGAACATATAGTTGCGGTGCTTGTTCTTAACAATGTTCATGAGATCTCGAGGTCTTTGATATTGCCGAGATGGACCAAGGATGCAAAACTTGTGGCGGTGCAGTCGATAGGCGTGATTTGGGATTCTGTGCAACTGACGCAACACTGGTGCCTGATGGATTGGTACCGGAAAGTGTGCAAGATTGCATGTCACAGCATTGAAAAGTTCCAATTTGCAAGAGACACAGCCATGCTGATGCTGAAGCACTTCGAGAACGAAGATACAGGGGACACCAGTTTTCCACCCGAGGGGCCACCTACTGAGGGTGGCAGGGGCCCGACGCGGAATCCACCCAGGCGCAATACAAAGGGTAACGGTGCTCATGGTGGAAAGAAAATCCAGCGATGTCGTTTGTACCGGGAGGTGGGACACAACAGGACGACGTGTCCGGGCCGCCGCACAATGGAGTCATCCAGCGCAGTTGCAGATGACATGGATTCGATGGACACTGACATGCTATATGATAACCTATCCGGCGATCTGTATGCGACAGCTGAGATTCCTTCGTTCCAATGCTCCGATAGTGACACGCAGGCTGGGTTTGCTAACAGCGACTTCGCTGGGACCAACACGTCCGGGCCTGTCATGTCTCTCGCCGATTGA 2436 0.5099 MSDRAEHGVGSFEGEGSARMESDKYDFQEDETEHDHHAEADVDNGDAVELEDSLDGAGGMSDNYAEDEFYAVDSVESIGWIDFLNLSEEDVFRFNFTDVDIAFEFYQQYAKHHGFGARRSRSEKRGEVRIRQEFVCHRQGYRSPKFYSMPNGQKRPRAETRCGCPARMLLRMDDESGRWLVAYFSDAHNHHVLELRLSSMLPGHRRMSEADIEQMNDMRKGGIGVSRIHGFMASLAGGYHNVLYTTRDMHNVNAKQLREGGLDAESCLRYLRECKTNDPALYYKEVVDGEGVLQHLFWCDGTSQIDYQVFGDVVTFDATYKKNVYLSPLVVFSGVNHHNQTVVFAAALVADEKEETYVWLLQQLQTLMKGKAPVSIITDGDRQMKSVIKQVFSEAHHRLCAWHLLRNATSNIGKPKFTRMFRDCMLGDYEVRTFERKWFEMVEKFGVADKRWVQDMYERRHSWATAHIRRKFFAGFRTTSSYTEFLRHFQRCLMFVRAKEVEADFECAKGDPVMTTNLKQLERSAAENYTRAIFYLFVPILDRACAMRVVDSEDNGSYFIHIVSRYGTPGKDWRVVATFNTREVRCTCMRMECFGVPCEHIVAVLVLNNVHEISRSLILPRWTKDAKLVAVQSIGVIWDSVQLTQHWCLMDWYRKVCKIACHSIEKFQFARDTAMLMLKHFENEDTGDTSFPPEGPPTEGGRGPTRNPPRRNTKGNGAHGGKKIQRCRLYREVGHNRTTCPGRRTMESSSAVADDMDSMDTDMLYDNLSGDLYATAEIPSFQCSDSDTQAGFANSDFAGTNTSGPVMSLAD* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2428 811 MobiDBLite consensus disorder prediction 1 57 - -
Ahy18g2428 811 MobiDBLite consensus disorder prediction 684 723 - -
Ahy18g2428 811 Pfam MULE transposase domain 313 407 IPR018289 -
Ahy18g2428 811 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 93 665 IPR031052 GO:0006355
Ahy18g2428 811 MobiDBLite consensus disorder prediction 17 44 - -
Ahy18g2428 811 Pfam FAR1 DNA-binding domain 104 193 IPR004330 -
Ahy18g2428 811 ProSiteProfiles Zinc finger SWIM-type profile. 573 609 IPR007527 GO:0008270
Ahy18g2428 811 PANTHER OS02G0262500 PROTEIN 93 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2428 Ahy-Chr18 124744492 124747064 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy18g2428 MULE 2.80E-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2428 - - ahf:112770447 1626.68