Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2426 ATGGAAACGAGTCCCGGCCGTACGATTAAGCTCCTCTGCAGCTACGGCGGCAAGAACCTCCCACGCGCTACCGACGGCGGGCTCCGTTTCATCGGTGGCCACACCAGAGTCACCGTGGACCACTTGTTGGTAAAGGTAGGAGCGTTGTGCGGTTCATCTGTGACGTTCTGGTGTCAATTGCCGAACGAAGACTTAGAAACCTTGATCTCCCTCACCAATGACGAAGATCTGACGAACATAAGCAAAGAATATGACCGCGCTTCGTCGAAACTACCTCATCCGTTGAATACCAGAGCCGTGCTGTTTCGGCCAGAATCGTCGAAGAAGGTTTCTCCGGCAACATCGTCTCCGTTGAAGAAGTTGAAGATGGCACTTAACATAATCCAAAATATTTAA 396 0.5101 METSPGRTIKLLCSYGGKNLPRATDGGLRFIGGHTRVTVDHLLVKVGALCGSSVTFWCQLPNEDLETLISLTNDEDLTNISKEYDRASSKLPHPLNTRAVLFRPESSKKVSPATSSPLKKLKMALNIIQNI* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2426 131 Pfam PB1 domain 35 90 IPR000270 GO:0005515
Ahy18g2426 131 Gene3D - 25 93 - -
Ahy18g2426 131 SMART PB1_new 23 100 IPR000270 GO:0005515
Ahy18g2426 131 SUPERFAMILY CAD & PB1 domains 25 110 - -
Ahy18g2426 131 PANTHER PB1 DOMAIN PROTEIN 6 118 - -
Ahy18g2426 131 PANTHER OS05G0427100 PROTEIN-RELATED 6 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2426 Ahy-Chr18 124729734 124730242 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2426 9 90 MAP Kinase Kinase Kinase AT1G04700 47.191 1.24e-18 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2426 - - aip:107611558 231.491