Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2389 ATGAGGAAGAAGCTCGATACCCGATTCCCTGCGGCTCGGATAAAGAAGATAATGCAAGCAGATGAAGATGTTGGAAAGATAGCACTTGCAGTTCCTGTTTTAGTCTCTAAAGCTTTGGAGCTATTTTTGCAAGATCTATGTGACCGCACGTATGAAATAACTCTTCAGAGAGGAGCAAAGACCATGAACTCGTTGCATTTAAAACATTGCGTACAAAGCTACAATGTCTTTGATTTTCTGAGGGATGTTGTCAGTAGGGTTCCTGACTACGGCCATGGCCATGGCCATGGCCATACAGAAGCTGGATCCGATGATCGGGTCATTTACAAAAGAAGGAAGGCTGCTACTGATGATTGTAACGACAGTGATGAAGAGGCTAAGAGGAGCAAAATGCATGAGTTAGGCCACACTGGTAGTACTGGAAGGGGAAGGGGCCGAGGTAGAGGAAGAGGCCGTGGCCGAGGAGCTAGAACTGCAGAAAGAGAGGCATATCGTCCGGAACCTGAAATTGAGCCTCGTGCTTCTATTCCGGAGAGCAGTCAACATAATAGTAGCACACCTGCGGCAATATTTGATGGTTCACAGTCTGAGGACTTACCAAAGGAGAATATCGCTGCCGTCGCTACTGAAAGCTTCGAGGCACTCCCAAATGCTGTTCCCAGTTCTGACACAAACCAAAACCTGGACAAAAACGATAGCACAGCAGCAGCAATTGGTGCCTCATTACCTGAACCTGAAAAAGAGAGCAAGCACGAGGAAATTCCGGGCTGGTCCCTTTCTGACGTGGACAAGATGGCCATCGACTCAATGCAGCTTGCGCAGCTCGGTGGTCAACTAGAAGTTGATGAAGAAGATTATGACGAGGAAGGGTAA 873 0.4765 MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYNVFDFLRDVVSRVPDYGHGHGHGHTEAGSDDRVIYKRRKAATDDCNDSDEEAKRSKMHELGHTGSTGRGRGRGRGRGRGRGARTAEREAYRPEPEIEPRASIPESSQHNSSTPAAIFDGSQSEDLPKENIAAVATESFEALPNAVPSSDTNQNLDKNDSTAAAIGASLPEPEKESKHEEIPGWSLSDVDKMAIDSMQLAQLGGQLEVDEEDYDEEG* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2389 290 PANTHER HISTONE SUPERFAMILY PROTEIN 1 289 - -
Ahy18g2389 290 MobiDBLite consensus disorder prediction 115 262 - -
Ahy18g2389 290 MobiDBLite consensus disorder prediction 153 172 - -
Ahy18g2389 290 MobiDBLite consensus disorder prediction 176 192 - -
Ahy18g2389 290 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Ahy18g2389 290 MobiDBLite consensus disorder prediction 115 139 - -
Ahy18g2389 290 MobiDBLite consensus disorder prediction 244 258 - -
Ahy18g2389 290 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Ahy18g2389 290 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 289 - -
Ahy18g2389 290 MobiDBLite consensus disorder prediction 215 234 - -
Ahy18g2389 290 SUPERFAMILY Histone-fold 4 91 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2389 Ahy-Chr18 123885668 123889653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2389 1 279 CCAAT-HAP5 Transcription Factor Family AT3G12480 51.056 4.34e-81 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Ahy18g2389 CBFD_NFYB_HMF 2.20E-19 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2389 K21752 - gmx:100814712 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2389 18 123885668 123889653 Ahy18g2389 18 123885668 123889653 ECH