Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2373 ATGTTAGTAAATTCCATGTGGAGAGAAGCTTTCATGAAGGCGTATAAGGCCATGGACAAAGAGCTAAGGTCTCATCCGAATCTGGATTGTTTCTGTAGTGGGAGCACGGCTGTAACCATAGTGAAGCAGGGATCAAATCTGTTCATGAGCAACATAGGGGATTCCCGAGCAATCATGGGATCCAAGGACAGCAATGACTCCATGGTGGCAATTCGGTTGACAATTGATTTGAAACCTGATTTGCCAAGGGAAGCTGAAAGAATCAAAAGGTGCAAGGGCAGGGTATTTGCCTTGCAAGATGAACCAGAAGTTCCAAGGGTGTGGTTACCTTTTGATGATGCACCTGGATTAGCAATGGCTAGAGCATTTGGCGATTTTTGTTTGAAGGATTACGGTGTCATTTCTATACCAGAATTTTCTTACCGGCTTCTTACAGACAAAGACGAGTTCATTGTTCTTGCCTCGGATGGAGTCTGGGATGTGTTAAGCAATGAAGAGGTGGTTGAGATAGTATCCACGGCACCAACTCGAGCATCAACAGCAAGGGTTCTGGTGGATTCTGCAGCCCGAGAGTGGAAACTCAAGTATCCCACGTCAAAGATGGATGATTGTGCTGTTGTATGCCTTTTTTTGGATGGTAAAATGGATGTGGAATCTGATTGTGATGAGCAATGCTATTCTTCTGCAACAATCCAAAGCAACCATTCGGGTAATCCAGTTGAGTCCGATGATGGTCAAAAGGCCGAGCCTTCTTTGCAAAGGAACTTCACTGTATGA 777 0.4479 MLVNSMWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMSNIGDSRAIMGSKDSNDSMVAIRLTIDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKDYGVISIPEFSYRLLTDKDEFIVLASDGVWDVLSNEEVVEIVSTAPTRASTARVLVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDVESDCDEQCYSSATIQSNHSGNPVESDDGQKAEPSLQRNFTV* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2373 258 CDD PP2Cc 2 211 IPR001932 -
Ahy18g2373 258 Pfam Protein phosphatase 2C 9 176 IPR001932 -
Ahy18g2373 258 ProSiteProfiles PPM-type phosphatase domain profile. 1 211 IPR001932 -
Ahy18g2373 258 PANTHER - 6 257 - -
Ahy18g2373 258 MobiDBLite consensus disorder prediction 232 258 - -
Ahy18g2373 258 SMART PP2C_4 2 209 IPR001932 -
Ahy18g2373 258 Gene3D - 2 219 IPR036457 -
Ahy18g2373 258 SUPERFAMILY PP2C-like 6 213 IPR036457 -
Ahy18g2373 258 PANTHER ALPHABET, ISOFORM E-RELATED 6 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2373 Ahy-Chr18 123336726 123340682 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2373 3 258 PP2C-type Phosphatase Gene Family AT1G03590 79.377 6.09e-146 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2373 - - aip:107612736 521.161