Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2372 ATGGATTCCACCTCTTCTACTTCTTTAAGATCATGCAAGTATCATGTATTCCTCAGCTTCAGGGGTGAAGACACTCGCCAAAAATTCACTAGCCATCTCTATGCCGCACTCACAAGGAAGGGAATCACTACCTTCATTGATGAGACCAATCTTTGCAAAGGTGACGCTATTTCAGATGAACTCCTAACAGCAATTGAAGACTCCATGTTTGCGATAATTGTTCTCTCACCAAACTACGCTTCCTCCACTTGGTGCTTGGACGAGCTCCAGAAGATCCTTGAATGCAAGCATAAGTTGGGACAACACGTCGAAGCGGTGTTCTACGATGTGGAGCCTTCTGATGTCAGACACCAGAAAGGAACCTTCGGAGAAGCTTTCATGAAACATGAAAAAAGATTCGGACGTGAAAGTGACAAGGTTAGAACATGGAGACATGTGTTAACAGAAGTTGCCGGTTACTCTGGTTGGACCTCCAATATTCAGAATGAGGCAACATTGGTGGAAGACATTTCTCAGAGCATACATAAAAGATTGATACCAAACTTGCCATCTACCATGAACAAGCTTGTAGGCATTGATTCAAGGGTGAAACAAGTGATTAGCTACATTGGTATTGGGTTGGATGATAATGTTCGTTTAATCGGCATATGTGGGATGGGCGGCATAGGCAAGACAACTACTGCTAGAATAGTATATGAAGCCATCCAAAGTCAATTTCAAGTTGCTTGTTTTCTCGCAAATGTAAGAGAAACATGTCAGAAAAATGGTATTCTTCAAGCACAACAAAAACTTGTTAGCCATATCAATGGAAGCTCCGGTCATTTTGATAATGAGCATGATGGGAAGAGAATAATTCGGGCTTCTTTGTGTCACAAAAAGGTTCTTCTTGTTCTTGATGATATAGATAAAGAAGAACAGTTGGAGAATTTGGCAGGGGAGCAAAATTGGTTTGGTTGTGGAAGCAGAATACTCATCACAAGTAGAGACATGCATGTGCTAAAGATAAGTGATCCACATGAGATTTATAATGTTGAAGAGCTAGGAGAAAGTGAAGCCTTTGATCTCTTTTGTTTGAAGGCTTTTAAACAACCAAAGCCTACAGAAGAGTATTTGGATTTGACCAAACAGGTGGTCAAATATTGTGCCGGTCTTCCATTGGCACTTGAGGTTTTGGGTTCGCACTTTTATGGTAGACCAGTTAAAGACTGGCTAAGTGCTTTGGGAAAACTCAAGAGCTCTCCACATGTTCCAATATTTGATAAATTAAAAATTAGTTTTGACGGCCTAGACTCAATGGATCAAGATATATCTCTAGACATTGCTTATTTCTTCAAAGGACGTTCTAAAGAAGTTGTAACAAGAATTTTAGATAATTGTGGATATTATATTGATATTGGCATATCTACCTTGCTGGATAGATCTTTATTAACAGTGACAAAATGTGGGGATTTGGAAATGCATGACTTGATTGAACAAATGGGCAAGTATATCGTAACCCAAGAATCGCCAAATGACCCTAGCAAGCGTAGCAGGTTGCGGGGTTACCACGACATCAATTATGTTCTTACTCAAAACAGGGGAACTGAAGCAACTCGTGATATCGTTGTTCAGAAACAGGATGCCTATCGAGAACAACACATAGTGCGTTGGAGAGGTCTGACCTTTTCGGATATATCTCAGCTAAAGCTCCTCAATTTAGATGGGGTAGAAGCTCTGATTCTCAGCTATGTTCCTTCTTCATTGAGAGTTTTCCGTTGGAGACGTTGTCCAATGGAAACTCTCCCGTTTATAAACGAAAGCTATGAGCTAGTTGAAATTAATCTGTATGATAGCCCCAGCATTGTAGATGTCTGGCACGGAAAAAAGTTTCTGGAAAAGCTGAAGTACTTATTTCTGTCCAAGTACCGTCGGCTAAAACGAATTCCGGATCTGTCGGAAGCTCCAAATCTTAAAGTGCTGGACATTCAAAATTGTGAAAAACTGAATGATATTCCACAGATCTCACAGGCCACAAGAGCCTTGTTAAGCTGA 2031 0.4052 MDSTSSTSLRSCKYHVFLSFRGEDTRQKFTSHLYAALTRKGITTFIDETNLCKGDAISDELLTAIEDSMFAIIVLSPNYASSTWCLDELQKILECKHKLGQHVEAVFYDVEPSDVRHQKGTFGEAFMKHEKRFGRESDKVRTWRHVLTEVAGYSGWTSNIQNEATLVEDISQSIHKRLIPNLPSTMNKLVGIDSRVKQVISYIGIGLDDNVRLIGICGMGGIGKTTTARIVYEAIQSQFQVACFLANVRETCQKNGILQAQQKLVSHINGSSGHFDNEHDGKRIIRASLCHKKVLLVLDDIDKEEQLENLAGEQNWFGCGSRILITSRDMHVLKISDPHEIYNVEELGESEAFDLFCLKAFKQPKPTEEYLDLTKQVVKYCAGLPLALEVLGSHFYGRPVKDWLSALGKLKSSPHVPIFDKLKISFDGLDSMDQDISLDIAYFFKGRSKEVVTRILDNCGYYIDIGISTLLDRSLLTVTKCGDLEMHDLIEQMGKYIVTQESPNDPSKRSRLRGYHDINYVLTQNRGTEATRDIVVQKQDAYREQHIVRWRGLTFSDISQLKLLNLDGVEALILSYVPSSLRVFRWRRCPMETLPFINESYELVEINLYDSPSIVDVWHGKKFLEKLKYLFLSKYRRLKRIPDLSEAPNLKVLDIQNCEKLNDIPQISQATRALLS* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2372 676 Pfam NB-ARC domain 209 414 IPR002182 GO:0043531
Ahy18g2372 676 Pfam TIR domain 13 184 IPR000157 GO:0007165
Ahy18g2372 676 ProSiteProfiles TIR domain profile. 12 178 IPR000157 GO:0007165
Ahy18g2372 676 PRINTS Disease resistance protein signature 288 302 - -
Ahy18g2372 676 PRINTS Disease resistance protein signature 381 395 - -
Ahy18g2372 676 PRINTS Disease resistance protein signature 213 228 - -
Ahy18g2372 676 PRINTS Disease resistance protein signature 645 661 - -
Ahy18g2372 676 Gene3D Ribonuclease Inhibitor 525 674 IPR032675 -
Ahy18g2372 676 Gene3D - 179 341 IPR027417 -
Ahy18g2372 676 SUPERFAMILY L domain-like 555 667 - -
Ahy18g2372 676 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 156 IPR035897 -
Ahy18g2372 676 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 173 439 IPR027417 -
Ahy18g2372 676 SUPERFAMILY "Winged helix" DNA-binding domain 418 502 IPR036390 -
Ahy18g2372 676 SMART till_3 13 153 IPR000157 GO:0007165
Ahy18g2372 676 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 9 664 - -
Ahy18g2372 676 Gene3D - 346 430 IPR042197 -
Ahy18g2372 676 Gene3D - 11 178 IPR035897 -
Ahy18g2372 676 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 664 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2372 Ahy-Chr18 123328041 123332124 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2372 14 658 WRKY Transcription Factor Family AT4G12020 29.926 3.35e-65 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2372 - - ahf:112769193 1354.73