Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2355 ATGGCTTCTTCAAATTCACCATGCGCAGCATGCAAATTTCTTCGAAGAAAATGCCAACCAGAGTGCGCTTTTGCACCATACTTCCCACCAGATCAGCCTCAGAAGTTCGCGAATGTTCATAGAATCTTTGGTGCAAGCAATGTTACGAAGCTTCTCAACGATCTACACCCTCACCAGCGCGAAGACGCCGTGAATTCCCTCGCGTACGAGGCGGAGATGCGCCTTCGCGACCCGGTCTATGGTTGCGTCGGCGTCATCTCCCTCCTCCAGCACCAGCTCCGGCAGCTCCAGGTGGATCTTTACTGCGCTAAATCGGAGCTATCTAGGTACCAAAATTTGAGTATCAACACCAACCACGCCTTCGTTGGTAGTGAATCTGGTGCCGTGGGATACCAGCATCAGCAGAACAATAATTCTGGTTCTGCTGGTGTTGGAACCCGCGACAACAATAGTTACTACCAACACCATCACCATCACCACCACCATCAGTTCTTTCCGCAACAACAGATTGTAAGAAGTTTTGATGGAGGGAGCAATTATGATGCTAGTCTCTTGGCTATGAACATCTCCGCTAGCTTAGGGCAGCTCAATCAGCTTCCGGCTGGCGGCGGTGACGACCGCCGCACCGTCAACAACCCTTCCTAG 645 0.5147 MASSNSPCAACKFLRRKCQPECAFAPYFPPDQPQKFANVHRIFGASNVTKLLNDLHPHQREDAVNSLAYEAEMRLRDPVYGCVGVISLLQHQLRQLQVDLYCAKSELSRYQNLSINTNHAFVGSESGAVGYQHQQNNNSGSAGVGTRDNNSYYQHHHHHHHHQFFPQQQIVRSFDGGSNYDASLLAMNISASLGQLNQLPAGGGDDRRTVNNPS* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2355 214 MobiDBLite consensus disorder prediction 130 150 - -
Ahy18g2355 214 PANTHER LOB DOMAIN-CONTAINING PROTEIN 6-LIKE 3 181 - -
Ahy18g2355 214 MobiDBLite consensus disorder prediction 130 162 - -
Ahy18g2355 214 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Ahy18g2355 214 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Ahy18g2355 214 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2355 Ahy-Chr18 123051665 123053559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2355 2 214 AS2 family AT1G65620 60.000 2.00e-76 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy18g2355 LOB 3.00E-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2355 - - gmx:100819502 333.183