Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2337 ATGACTCTCTTAATTATTGAAACACAAACACCAATGTCTATATTGAAGAACAAGGTTGTGCTTCAGAACAAGAGAATTGAAATAGATGCTGCTGAGTATGATACTGTTAAGTATTGGAAACAAAGGGCCTTGCGTTTGGAGAAATTGGTTGAGGCAAGCATCCAGAGAGAGCAGATACTCCAAGACAAGTTGCTTGAAAGGATCAACAACATTGAGAGGCAATCCTCACATGTAGAAGAACTCTCCCAGATTCTCAAAAGAGCAGATAATTTCTTGCATTTCATCCTCCAGAATGCACCTGTTGTTATTGGCCATCAGGACAAGGAATTGCGATACCGGTTTATCTATAATCATTTTCCAAGTTTGCAAGAGGAGGACATAATAGGAAAAACAGATGTGGAAATATTCACAGGATCTGGGGTCAAAGAATCTCAAGAGTTCAAGAGAGAAGTCTTGGAGAAAGGATTACCTGCAAAAAGGGAAATCACTTTTGAGACAGAACTATTCGGATCAAAGACATTCTTGATATATGTAGAACCCGTGTTTAGCAAAGTAGGGGAGACAATTGGAATAAACTATATGGGAATGGATGTAACAGATCAGGTGCAGAAAAGAGAAAGGATGGCCAAGATTCGGGAAGAGATTGCAGTTCAGAAAGCAAAGGAAACAGAACTAAACAAAACCATTCACATTACAGAGGAGACTATGAGAGCAAAACAAATGCTGGCCACAATGTCTCATGAGATAAGGTCTCCATTATCTGGCCACAATATCATGATGTATTTACTATCAACATCTCAACACTATGTTAACACACATAAATAA 825 0.3855 MTLLIIETQTPMSILKNKVVLQNKRIEIDAAEYDTVKYWKQRALRLEKLVEASIQREQILQDKLLERINNIERQSSHVEELSQILKRADNFLHFILQNAPVVIGHQDKELRYRFIYNHFPSLQEEDIIGKTDVEIFTGSGVKESQEFKREVLEKGLPAKREITFETELFGSKTFLIYVEPVFSKVGETIGINYMGMDVTDQVQKRERMAKIREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGHNIMMYLLSTSQHYVNTHK* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2337 274 SUPERFAMILY PYP-like sensor domain (PAS domain) 81 199 IPR035965 -
Ahy18g2337 274 Gene3D - 202 273 - -
Ahy18g2337 274 Coils Coil 54 74 - -
Ahy18g2337 274 CDD HisKA 239 262 IPR003661 GO:0000155|GO:0007165
Ahy18g2337 274 PANTHER HISTIDINE KINASE CYTOKININ RECEPTOR 15 266 - -
Ahy18g2337 274 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 15 266 - -
Ahy18g2337 274 Gene3D PAS domain 70 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2337 Ahy-Chr18 122544549 122545903 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2337 16 267 Histidine Kinase Gene Family AT5G10720 69.841 7.83e-119 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2337 - - aip:107611583 520.39