Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2332 ATGGGTTCTTCAGTTGGAGGAGGCAACAGCAACAACGCAGGCGTGGAGTGGCACGTGCGCCCTTCCAACCCTAAGAACCCCATCGTTTTTTTCGATGTCACCATCGGTAACATACCTGCTGGCAGGATCAAGATGGAGCTTTTCGCTGATATTACCCCCAAAACCGCTGAGAATTTCAGGAAAGCAGGACTACCTGTCGGCTACAAGGGTAGTCAATTTCATAGAGTTATTAAGGATTTTATGATTCAGGCTGGTGATTTCGTTAAGGGTGATGGCAGTGGATGTGTCTCTATCTATGGACACAAGTTTGATGATGAAAATTTTATTGCCAAGCATACTGGCCCTGGTCTTCTTTCAATGGCAAACAGTGGAGTTAACACCAATGGTTGTCAGTTCTTCATAACTTGTTCAAAATGTGACTGGCTTGACAACAAGCATGTGGTTTTTGGGAGAGTGCTTGGAGATGGTCTTTTGGTTGTCCGGAAGATCGAGAATGTCGCAACTGGACCCAATAACCGGCCGAAATTAGCTTGTGTCATTGCTGAATGTGGTGAAATGTAA 561 0.4528 MGSSVGGGNSNNAGVEWHVRPSNPKNPIVFFDVTIGNIPAGRIKMELFADITPKTAENFRKAGLPVGYKGSQFHRVIKDFMIQAGDFVKGDGSGCVSIYGHKFDDENFIAKHTGPGLLSMANSGVNTNGCQFFITCSKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACVIAECGEM* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2332 186 SUPERFAMILY Cyclophilin-like 17 186 IPR029000 -
Ahy18g2332 186 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 68 85 IPR020892 GO:0003755|GO:0006457
Ahy18g2332 186 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE H 20 186 - -
Ahy18g2332 186 Gene3D - 16 186 IPR029000 -
Ahy18g2332 186 CDD cyclophilin_ABH_like 27 184 - -
Ahy18g2332 186 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 73 85 IPR002130 GO:0000413|GO:0003755
Ahy18g2332 186 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 144 159 IPR002130 GO:0000413|GO:0003755
Ahy18g2332 186 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 131 143 IPR002130 GO:0000413|GO:0003755
Ahy18g2332 186 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 47 62 IPR002130 GO:0000413|GO:0003755
Ahy18g2332 186 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 116 131 IPR002130 GO:0000413|GO:0003755
Ahy18g2332 186 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 20 186 - -
Ahy18g2332 186 PIRSF Peptidylpro_ismrse 15 186 IPR024936 GO:0003755
Ahy18g2332 186 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 30 185 IPR002130 GO:0000413|GO:0003755
Ahy18g2332 186 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 31 184 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2332 Ahy-Chr18 122396696 122403076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2332 23 183 U-box Gene Family AT5G67530 42.331 9.20e-26 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2332 K09567 - gmx:100813835 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2332 18 122396696 122403076 Ahy18g2332 18 122396696 122403076 ECH