Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2293 ATGGGTATGTCTGCTGCGGCACAGTTCCATGTTTTGGCTGTTGATGACAGCCTAATTGATAGAATGTTGATTGAGAGGCTCCTCAAAACCTCTTCATTTCATGTTACAACAGTGGACTCTGCCATTAAAGCTTTACAATACCTTGGTATGGTTGAAGATAAATTAAAGAGTTATGAGACACCTGAAATTCATCAGGATGAGGAAGTTAATGTAAATCTGATCATAACAGATTACTGTATGCCAGAAATGACTGGCCATGATTTGCTAAGAAAAATTAAGGAATCAAATTCTCTTAAAGACATACCAGTTGTGATCATGTCCTCAGAGAATGTTCCATCAAGGATCAATAGATGCTTGGAAGATGGGGCTGAAGAATTCTTTCTAAAACCAGTTCAACAATCAGATGTGAACAAGCTGAAACCCCATTTATTGAAATCAAGATCCAAGGAAGAAGAGGAAACCCAACCCATCAACAATAACAAGAGGAAAACAAGAATCAAGTGCACCATTTAA 513 0.3762 MGMSAAAQFHVLAVDDSLIDRMLIERLLKTSSFHVTTVDSAIKALQYLGMVEDKLKSYETPEIHQDEEVNVNLIITDYCMPEMTGHDLLRKIKESNSLKDIPVVIMSSENVPSRINRCLEDGAEEFFLKPVQQSDVNKLKPHLLKSRSKEEEETQPINNNKRKTRIKCTI* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2293 170 CDD REC_typeA_ARR 11 139 - -
Ahy18g2293 170 SMART REC_2 9 143 IPR001789 GO:0000160
Ahy18g2293 170 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 165 IPR045279 GO:0009736
Ahy18g2293 170 MobiDBLite consensus disorder prediction 144 160 - -
Ahy18g2293 170 Pfam Response regulator receiver domain 11 136 IPR001789 GO:0000160
Ahy18g2293 170 SUPERFAMILY CheY-like 9 151 IPR011006 -
Ahy18g2293 170 MobiDBLite consensus disorder prediction 144 164 - -
Ahy18g2293 170 Gene3D - 10 169 - -
Ahy18g2293 170 PANTHER RESPONSE REGULATOR ARR8, PUTATIVE-RELATED 2 165 - -
Ahy18g2293 170 ProSiteProfiles Response regulatory domain profile. 10 144 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2293 Ahy-Chr18 121417773 121420051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2293 1 152 Response Regulator Gene Family AT3G57040 63.694 4.67e-67 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy18g2293 Response_reg 8.60E-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2293 K14492 - gmx:100787436 254.988