Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2286 ATGGCGGCAAAATTGATGGAATTCTTTTATCAAGAACTAGCCAAGGCTACAAATAACTTCAGCTCTGATAACAAAATTGGTCAGGGTAGATTTGGAGCTGTCTATTTTGCAAAATTGAGATGCCAAAAAGCAGCAATTAAGAATATGGATGTTCAAGCATCAACAGAGTTTCTTTCAGAGTTGATGGTCTTAAAACATGATCATCACTTGAATTTGGCCAATATTTTGCATGGTACAGGTGACAATGTTGGTAACATTATTCCAGGGAGTGAACCTTTGGCATGGTCAACAAGGGTGCAAATTGCTCTGGATTCAGCAAGAGGACTTGAATATATACATGAACACACTGTTCCTGTTTATATCCACCGTGATGTGAAACCTGCTAACATATTAATATATAAAGACTTTTGTGAAAAGGTTTTGGAAATTCACCAAGTTACAAATTTTGGGCTAACTAAACTTAGGGAAGTTGGAAGCTCTTTATCACTTCATACTCGTCTTGTGGGAACATTTAGATACATGCCTCCAGTCGGATCAGAATGCTTCAATCAGCTAAAGGTTTTTACGGCCGCAGCACCTATAATACTTCTGGCAATCAAATCAGAAGAAAACAAGCTACAAGAAGTCATGGTTGGATTAGCAGCAAATGTTTTCACATTCATGTCCTCTCAGGAATCAAGCTATGTATTTCAAGAAGCTAAAATCACTGAAGTTGAACTGGCAAGTATACTAGTACATATTCTCAAGAAGCACAAGTATCCGGCAACAAAGGTGCTGAGGATAAGGAGGTTTGCCATAAAGTTTGAGATTTGGATGATGAAAGACAAAGTAAAAAACATATATACCTTCAAGCATATGGGAATGGAGAAGGTGCTGGAAGGTGTATTAGAAACCACATCAGAGCTTGAAAGCTTCAATGTTTTCTCTAGTACTGTTGGATTTAACAGGCACAATCTAACAATTCACTCACTGGTTGAGACAGCCTTCAAGTTGCTGGAAAACAGGTGA 1008 0.381 MAAKLMEFFYQELAKATNNFSSDNKIGQGRFGAVYFAKLRCQKAAIKNMDVQASTEFLSELMVLKHDHHLNLANILHGTGDNVGNIIPGSEPLAWSTRVQIALDSARGLEYIHEHTVPVYIHRDVKPANILIYKDFCEKVLEIHQVTNFGLTKLREVGSSLSLHTRLVGTFRYMPPVGSECFNQLKVFTAAAPIILLAIKSEENKLQEVMVGLAANVFTFMSSQESSYVFQEAKITEVELASILVHILKKHKYPATKVLRIRRFAIKFEIWMMKDKVKNIYTFKHMGMEKVLEGVLETTSELESFNVFSSTVGFNRHNLTIHSLVETAFKLLENR* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2286 335 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Ahy18g2286 335 Gene3D Transferase(Phosphotransferase) domain 1 84 191 - -
Ahy18g2286 335 SMART serkin_6 20 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g2286 335 ProSiteProfiles Protein kinase domain profile. 20 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g2286 335 SUPERFAMILY Protein kinase-like (PK-like) 5 176 IPR011009 -
Ahy18g2286 335 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
Ahy18g2286 335 Pfam Protein kinase domain 21 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g2286 335 PANTHER - 2 264 - -
Ahy18g2286 335 ProSitePatterns Protein kinases ATP-binding region signature. 26 47 IPR017441 GO:0005524
Ahy18g2286 335 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 2 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2286 Ahy-Chr18 121242667 121244438 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2286 4 176 Receptor kinase-like Gene Family AT3G21630 54.787 2.77e-53 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Ahy18g2286 Pkinase 1.30E-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2286 - K13429 ahf:112770378 662.144