Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2269 ATGAAAATCCCATCAATGCCATCATCACCCTCCTTCTCCTTTGTTCTCTTCCTTTTATTCCTCATTGTACCATTACTACAAGCCCAACAACAATCTCCATCAAAAAACGCCCCTCCTCCTCCTCCTCCTCCTCCTCCTACTTCATTGCCTCCGCCTGCTTCGGCTCAAAAACATTTTCCTCCTCCACCTCCACCTTCTTCTTCGACTCGAAAAGATGCTCCACCTCCTCCTCCTCCTTCACTGCCTCCACCTGCTTCGGCTCTAAAATATTTCCCTCCTCCACCTCCAACTTCTTCTCCACCTCCTCCTTATTTTCCTCGAAAATATGCTCCTCCTCCTCCACCTTCCCCTTCCTCTCATCCCTCGCCTTCTCCAGCTCCAATGCTTACCCCTCCTTCTCCGCCTTCAAAACACTCCCCTCCTCCGTCTCCACTACCACCTTCTACCTCTTCAGCTCCTCCCTCTCCTTCTCCAGTTTCTCCTCCTCCTTCTCCTTCCTCCAAAGAAGCCTGCCAGTCTACACTGTACCCAAAACTCTGCCGCTCCATTCTAAAATCCATTCGCTCGTCACCATCCGATCCATACAACTTAGGGAAATTCTCCATCAAACAAAGCCTCAAAAAAGTCAAGAAGCTCGCAAAAGCGTTCGATGACTTCCTCCACCACAAGTCGTCTTCTTACCTCAACCAAGCCGAGATCTCGGCTCTCGACGACTGCCGCGACCTCAACCAACTCAACGTAGACTACCTCCAAACCGTCTCCGACAACCTCAAATCTGCGACCTCATTAGACAGCAATAGAAATGAGGAATTGGTAGAGGACATCGAAACGTATCTCAGTGCGGTGGCTACTAACCACTACACTTGCTATGATGGGTTGGTGGCGGCGAAGAGTAACATCGCAGACGCGCTCGCGGTGCCTCTGAACGATGTGAAGCAACTGTATAGTGTGTCGCTTGGGTTGGTTACGGAGGCTCTGAACAAGAATAGGAAGAAGCATAAGACAAGAAAGCATGGTCTCCCTACTAATGACTACAAAGTTAGACAGCCTCTGAAGAAGCTCATTAAGTTTCTTCACACAACAACTAATAATAGTTGCAAAGAATCATCATTCAATTGTACAAGGAAAAGCGAAAGGATTCTTGAGGAAAGCAATAACAACAGCAAAGGAATTCTACTGAACAGCTATGTGATTGTGAGCATTGATGGGACAGGGAACTTCACTTCCATTGGAGACGCCATTGCTTTTGCTCCGAACAATTCAAGATCAGAAGATGGCTATTTCCTTATCTATGTCACAGAAGGGTGCTACGAGGAATATGTCACTATCCCCAAACAAAAGACTAACATTTTGCTTGTTGGAGATGGTATCAATAAGACTGTCATCACAGGGAATCATAGTGTCATAGATGGTTGGACAACTTTCAATTCTTCAACTTTTGCTGTTTCTGGAGATAGATTCATGGCAGTAGATATTACATTCAGAAACACAGCTGGCCCTGAGAAGCACCAAGCAGTAGCACTTAGAAGCAACGCTGATCTCTCCACATTCTACCGATGCAGTTTTGAAGGATATCAAGACACACTCTACGTTCACTCTCTCAGACAATTTTACAGAGAATGTGACATCTATGGAACGGTAGACTTCATCTTTGGTAACGCAGCCGTAGTTTTCCAGAGCTGCAACATCTACGCAAGAAAGCCAATGACTAACCAGAAAAACTCCGTCACGGCGCAAGGCCGGACGGATCCAAACCAAAACACCGGAATCTCAATCCAAAATTGCACCATCCAGGCCGCCCCTGACTTGGCGGCCGACGTGGAATCCACGCCGAATTACTTAGGTAGGCCGTGGAAAGAGTACTCGAGGACGGTTTATATGCAGTCATATATTGGTGACTTGATTAGCCCTTCTGGATGGTTAGAGTGGAATGGGACCGTTGGGTTAGACACACTCTTCTATGGTGAATTTAATAACTATGGTCCTGGTGCTGGTACAAGTAACAGAGTAAAATGGAAGGGTTACAACTTGTTGAATGCTACTCAAGCTTGGAATTTCACTGTTCTTAATTTTACCTTGGGAGATACATGGCTTCCTTACACTGATATACCATACACTGCAGGCCTAGAAGATTAA 2136 0.463 MKIPSMPSSPSFSFVLFLLFLIVPLLQAQQQSPSKNAPPPPPPPPPTSLPPPASAQKHFPPPPPPSSSTRKDAPPPPPPSLPPPASALKYFPPPPPTSSPPPPYFPRKYAPPPPPSPSSHPSPSPAPMLTPPSPPSKHSPPPSPLPPSTSSAPPSPSPVSPPPSPSSKEACQSTLYPKLCRSILKSIRSSPSDPYNLGKFSIKQSLKKVKKLAKAFDDFLHHKSSSYLNQAEISALDDCRDLNQLNVDYLQTVSDNLKSATSLDSNRNEELVEDIETYLSAVATNHYTCYDGLVAAKSNIADALAVPLNDVKQLYSVSLGLVTEALNKNRKKHKTRKHGLPTNDYKVRQPLKKLIKFLHTTTNNSCKESSFNCTRKSERILEESNNNSKGILLNSYVIVSIDGTGNFTSIGDAIAFAPNNSRSEDGYFLIYVTEGCYEEYVTIPKQKTNILLVGDGINKTVITGNHSVIDGWTTFNSSTFAVSGDRFMAVDITFRNTAGPEKHQAVALRSNADLSTFYRCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVFQSCNIYARKPMTNQKNSVTAQGRTDPNQNTGISIQNCTIQAAPDLAADVESTPNYLGRPWKEYSRTVYMQSYIGDLISPSGWLEWNGTVGLDTLFYGEFNNYGPGAGTSNRVKWKGYNLLNATQAWNFTVLNFTLGDTWLPYTDIPYTAGLED* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2269 711 CDD PMEI-like_3 170 324 - -
Ahy18g2269 711 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 169 323 IPR035513 -
Ahy18g2269 711 SMART PMEI_2 162 321 IPR006501 GO:0004857
Ahy18g2269 711 MobiDBLite consensus disorder prediction 28 172 - -
Ahy18g2269 711 Gene3D - 394 711 IPR012334 -
Ahy18g2269 711 Gene3D Invertase/pectin methylesterase inhibitor family protein 168 325 IPR035513 -
Ahy18g2269 711 MobiDBLite consensus disorder prediction 34 165 - -
Ahy18g2269 711 Pfam Plant invertase/pectin methylesterase inhibitor 168 320 IPR006501 GO:0004857
Ahy18g2269 711 PANTHER PECTINESTERASE 160 709 - -
Ahy18g2269 711 ProSitePatterns Pectinesterase signature 2. 543 552 IPR033131 -
Ahy18g2269 711 PANTHER PECTINESTERASE 160 709 - -
Ahy18g2269 711 Pfam Pectinesterase 397 694 IPR000070 GO:0030599|GO:0042545
Ahy18g2269 711 SUPERFAMILY Pectin lyase-like 394 708 IPR011050 -
Ahy18g2269 711 TIGRFAM PME_inhib: pectinesterase inhibitor domain 160 323 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2269 Ahy-Chr18 120761302 120766116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2269 124 709 Carbohydrate Esterase AT3G10720 57.355 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2269 K01051 - gmx:100808277 837.025