Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2252 ATGGGGAGCGTTCACAAAAATTCAACAAAGAGTTCTGTTGAATTTGATGATTTGAGTTTTGAGTATAGTGGTTCTAGTGAAGAAAATGATATAAATATATCTCAAAAGAAGGGTACAATTGATGAAGCTATGAAAATGGTCGATCGTGGAGATGGATTTGGTGAAGTTGAGAAGAAGTTAACTGAGTTGACCAGGGATGACATTTGGGGTATTGAGCATGATAGTGTAGAGCAGTGTGTTCAATTCTACAAAAATTATGCCAAAGTACATGGTTTTGTTGCAAGGTGTGATGAAAAGGGTTATGATTTCAACGGCAACCTTAACATGAGACAAATGGTTTGTAATAGAGAGGGTACACGGAGAAAGAAGTATCTGGAGATGGAGAATAGGAAAAGAGACCACAGGCCGATAACACGTGTAATGTGTCAAGCGAGAATTAGATTTCACTATGATATGAAATTGAGGAAGTGGAAAGTCACTGCATTTGAAGAGACTCACAATCATGACCTCATCCCACCTAAATATATACAATTTGTCCCCGCATATCGCGTAATGACCGAGGCCGACAAAGCGCAAGCCAACAGTTTGCATGATTATGGTGTGAGAACTTGCCATATAATGGGGTTCATGTTAAAGCAAAAGGGAGGACCTGGAAAAATTGGTTTTACAAAGAAGGATTTGTATAATCATTTCGACAAATCAAAGCGTGCTAAAGTGAAAGATGGTGATGCATATGCAGCATTGAGTTACTTGATTTCTAAGGCCGATGAGGATCCATTGTTGCAAGGGAAATTTACTCTGAAAGATAATAATCTTGAAAATTTAGTATGGGCTGACGGAGCTAGCATAATCAATTATCAATGTTTTAGTGATGTACTAGCATTTGACACAACATACCAGAAGAATAAATATAACAAGCCATTGGTTGTCTTCTCAGGAACTAACCATCACGGGCAGACATGCATATTTGGTTGTGGCTTGCTAGCAGATGAGAAGCATGAGACATATGTATTAGTTTTGAAGATGTTTCTTGAAATAATGGGTAATAAACATCCAATAGCAGTGGTGACAGATGGTGATCTTGCAATGAGAGGAGAAATTAGAGAGGTGATGCCAAATGCAACGCACCGACTTTGTGCATGGCATTTACATCGCAACGCGTGTGAAGCTATCAAAAATTCTGAGTTTCTTCATGGATTGAAGCACCTCATGTACGGGAATTTTTTTCCGGATGAGTTTGAAGATAAATGGCATCGCTTGGTATCAAAATTCAAGCTTTCTGAAAATGAATGGGTGAAAAAAACATACGAGATCAAAAGGATGTGGGCTTCCGCATATTTGAACGACACGTTTTTTGGTCGAATTAGGACTACGTCACAATGTGAAGGAATTCATTCGTTGATAAAGCACTATATTGGTAAAAAATGTTATCTTTTGGATTTGATGCATAATCTTAACGAGGCAGTGAGGCAATATCGGACAAATGAGCTATTATCTGATTTTAAGTCATTGTTCTCAAGTCCAGTTTTAACTACATGTTTCGAAGACATCGAAAAGGAAGCAGCCAATATTTTTACCCACAATATGTTTAAAGAGGTAAGAAATGAGATACTAGAAGCGAGTAAACAAAACGTTGTCAGCCATTCAATTGACGGTAACAAAATTGAGGTGAGAATGAACAAATATCAAGAGCCGGCTATTGAATATAAGGTTCGGTATGATAGAAGCACTAACAACTTTGCTTGTGATTGTCGATTATTTGAGAGCCGTGGTATCCCTTGTTCCCATATTTTTTGTACTATGAGACATGACCATATTAGCACTATTTCTAATACTCTTATTCACAAGAGGTGGACGAAAGATGCTAAAAAAGAATACATTAGTTCACTTACTGCCGAGGATATTGAATCTGAAAAGATTGCTAGTGTTAGGTACGGTGCTCTAGCGACGCTTTGTTTTTCACTATGTGATAAAGCATCGAAACATCGAGATGACTTCATAGAAATCAGAGAAGACATTTTTGGATTGATTATGAAACTCCATAAAAGACACAATCCAAATAACAAGCTTCCTTCTACCGCCAACTTGGTAGGTGACCCAAGTGTTGTGAAGACAAAAGGAGCCCCACGACAAACAACCAAGACTGCTAAGGCCCGTAAGTGTTCGCATTGTAAACGGATTGGTCATACGGTTCGTAGGTGTCCAAAACTATATGGTGGAGAATGCTCACTAAGTTCGAACGAAGATAAATTGAATACTGACATTGACCAATCAAGTACAGAATCAAATGGTGTTACGGATATGTCTGATGAGGAAACAATACACCAATGTAACGAAAAACGTAGTGATTTATTTGAAAATATCCAGAAAAAAGTGAACAGGCCTCATGTCCAATCTACAGAAGTTCAAAGCAACCAGTACAATGATAACAGAACAGAAAAGCCTACTGCACAAACAAAAATAAATGCACCTGAAGCTGCTTTTGCGGACACAAAGAAGGATAGAATTTCAAGTGTCGAAAAGAGTAAGAAAAGAAAGCGGTTAGATAATAATCGCATCGAAAAGGGTAGAAAACCAAATGATGCAGATCATCAAGAAGTTCCCCCCAAAATTGGAACTTATGGTGCTATATCCTCTACAAAGGGTATTGAGAATTTTCAATGGATGAATGGATTACCTATGTACCCCAATTTTAATGGATATCCCATGCCACCTTTTTATTCATACAGTGGAGGTGGAACACCCATGTTTCAGATAAATCCATCACAAGCTAATGTACCAAATTACTACTATTATTGGAATGCAAGAGTTCAAGATTTGAAGAAGAAGAAGAATTAA 2838 0.3774 MGSVHKNSTKSSVEFDDLSFEYSGSSEENDINISQKKGTIDEAMKMVDRGDGFGEVEKKLTELTRDDIWGIEHDSVEQCVQFYKNYAKVHGFVARCDEKGYDFNGNLNMRQMVCNREGTRRKKYLEMENRKRDHRPITRVMCQARIRFHYDMKLRKWKVTAFEETHNHDLIPPKYIQFVPAYRVMTEADKAQANSLHDYGVRTCHIMGFMLKQKGGPGKIGFTKKDLYNHFDKSKRAKVKDGDAYAALSYLISKADEDPLLQGKFTLKDNNLENLVWADGASIINYQCFSDVLAFDTTYQKNKYNKPLVVFSGTNHHGQTCIFGCGLLADEKHETYVLVLKMFLEIMGNKHPIAVVTDGDLAMRGEIREVMPNATHRLCAWHLHRNACEAIKNSEFLHGLKHLMYGNFFPDEFEDKWHRLVSKFKLSENEWVKKTYEIKRMWASAYLNDTFFGRIRTTSQCEGIHSLIKHYIGKKCYLLDLMHNLNEAVRQYRTNELLSDFKSLFSSPVLTTCFEDIEKEAANIFTHNMFKEVRNEILEASKQNVVSHSIDGNKIEVRMNKYQEPAIEYKVRYDRSTNNFACDCRLFESRGIPCSHIFCTMRHDHISTISNTLIHKRWTKDAKKEYISSLTAEDIESEKIASVRYGALATLCFSLCDKASKHRDDFIEIREDIFGLIMKLHKRHNPNNKLPSTANLVGDPSVVKTKGAPRQTTKTAKARKCSHCKRIGHTVRRCPKLYGGECSLSSNEDKLNTDIDQSSTESNGVTDMSDEETIHQCNEKRSDLFENIQKKVNRPHVQSTEVQSNQYNDNRTEKPTAQTKINAPEAAFADTKKDRISSVEKSKKRKRLDNNRIEKGRKPNDADHQEVPPKIGTYGAISSTKGIENFQWMNGLPMYPNFNGYPMPPFYSYSGGGTPMFQINPSQANVPNYYYYWNARVQDLKKKKN* 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2252 945 MobiDBLite consensus disorder prediction 790 870 - -
Ahy18g2252 945 MobiDBLite consensus disorder prediction 687 715 - -
Ahy18g2252 945 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 73 668 IPR031052 GO:0006355
Ahy18g2252 945 SUPERFAMILY Retrovirus zinc finger-like domains 708 739 IPR036875 GO:0003676|GO:0008270
Ahy18g2252 945 PANTHER OS02G0262500 PROTEIN 73 668 - -
Ahy18g2252 945 MobiDBLite consensus disorder prediction 792 819 - -
Ahy18g2252 945 MobiDBLite consensus disorder prediction 748 771 - -
Ahy18g2252 945 MobiDBLite consensus disorder prediction 827 865 - -
Ahy18g2252 945 Pfam MULE transposase domain 292 386 IPR018289 -
Ahy18g2252 945 Pfam FAR1 DNA-binding domain 81 171 IPR004330 -
Ahy18g2252 945 SMART 26again6 580 607 IPR006564 GO:0008270
Ahy18g2252 945 ProSiteProfiles Zinc finger SWIM-type profile. 569 605 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2252 Ahy-Chr18 119946440 119949542 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy18g2252 MULE 2.90E-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2252 - - adu:107487303 1899.4