Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy18g2209 | ATGTTAAAAAATGGAAAATCAAAATCACATGTATACACTTACAGCCCTACCAACTACAGAGTTCCAAATGCCATGTTCCTCTCCCACCGCCGCGATGCAGCGCTCCGCTTCACGTCCTCCGCCGCCACTACTGCTACCGACGCCGACATTGGGCCGCCAGGGGTTGTCTCCAGAGTTTCTTCCGTCACCGCCGGACCTAACTCTTCCTCCGCATCCCACTTGCTTCAAGCTTCTTCTTGGCCTGCTGCCATCGCCGCCGCTGCCGCTGCCGCAAATGGTGGCTCCCCCGCGCTCGACCTGAAACGCTCTTCTGAATTTGGGCAAAGCGAAGCTTGGTATTCTACAAACTCACTAGCTAAGCGCCCTAGATATGAAAGTGGAAGCAATTTGCCTATATATCCCCAGAGACCAGGAGAGAAGGATTGTGCCCACTATATGCTTACAAGAACCTGTAAATTTGGAGATAGCTGCAAATTTGACCATCCTATTTGGGTTCCTGACGGTGGAATACCAGATTGGAAAGAGATTTCAAACACTGTTTCGAGTGAAACACTTCCTGAGAGAATAGGAGAACCAGACTGTCCATACTTTATTAAAACTCAGAGATGCAAGTTTGGTTCAAAGTGCAAGTTTAATCATCCAAGATCTTCTGAAAATGGTGAAATTTCTGCCTTACCTGAGAGGCCATCAGAGCCCCTCTGTGCGTTCTATGTGAAGACTGGGAGATGTAAATTTGGTGCTACTTGTAGATTCCATCACCCGAAAGACATCCAGATTCTGACGTCTGATGAACTGAGTTATAATGCTGAACAAACACAAGAAAATTCCATAAGGGAGGGAGCAACAGGAGATACACAATCTTTCTTGTCTCCACTATTGCATAATAGCAAAGGACTTCCAGTAAGAATGGGGGAAGTTGATTGCCCATTCTACATGAAAACTGGAAGTTGCAAGTATGGTGCTACATGCCGCTACAACCATCCTGACAGGAATGCAATTTATCCGCCAGTTGCTACATTTGGTTCTTCTATGGTGACATCTATGGCTGCTAATCCAAGTATTGGATCTATAAATCCTTCTGTACCTATTTATCAAGCATATGACCCAAGGTTGTCAAATCCAATGTCTCAACTTGGAGTGGCAGAAATTATGTATCCTCAGCGTCCTGGACAGATTGAATGCGATTTCTATATGAAAACTGGTGAGTGCAAATTCGGGGAAAGATGCAAGTTCCATCACCCTCTTGACCGATCAGCAACATCAAGCATTAAGCTCACTCCCGCAGGATTACCTAGGAGAGAGGGTGTTAGCATCTGTCCGTATTACATGAAAACTGGCACTTGCAAGTTTGGTGCGACCTGTAAGTTTGACCACCCGCCACCCGGAGAAGTTATCGAGATAGCAAAATCGCAAGGAACATCCGCAACTGACGGAGGAGAAGCAGATTCATGA | 1452 | 0.4614 | MLKNGKSKSHVYTYSPTNYRVPNAMFLSHRRDAALRFTSSAATTATDADIGPPGVVSRVSSVTAGPNSSSASHLLQASSWPAAIAAAAAAANGGSPALDLKRSSEFGQSEAWYSTNSLAKRPRYESGSNLPIYPQRPGEKDCAHYMLTRTCKFGDSCKFDHPIWVPDGGIPDWKEISNTVSSETLPERIGEPDCPYFIKTQRCKFGSKCKFNHPRSSENGEISALPERPSEPLCAFYVKTGRCKFGATCRFHHPKDIQILTSDELSYNAEQTQENSIREGATGDTQSFLSPLLHNSKGLPVRMGEVDCPFYMKTGSCKYGATCRYNHPDRNAIYPPVATFGSSMVTSMAANPSIGSINPSVPIYQAYDPRLSNPMSQLGVAEIMYPQRPGQIECDFYMKTGECKFGERCKFHHPLDRSATSSIKLTPAGLPRREGVSICPYYMKTGTCKFGATCKFDHPPPGEVIEIAKSQGTSATDGGEADS* | 484 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy18g2209 | 483 | SMART | c3hfinal6 | 388 | 415 | IPR000571 | GO:0046872 | |
Ahy18g2209 | 483 | SMART | c3hfinal6 | 136 | 163 | IPR000571 | GO:0046872 | |
Ahy18g2209 | 483 | SMART | c3hfinal6 | 302 | 329 | IPR000571 | GO:0046872 | |
Ahy18g2209 | 483 | SMART | c3hfinal6 | 433 | 460 | IPR000571 | GO:0046872 | |
Ahy18g2209 | 483 | SMART | c3hfinal6 | 188 | 215 | IPR000571 | GO:0046872 | |
Ahy18g2209 | 483 | SMART | c3hfinal6 | 228 | 255 | IPR000571 | GO:0046872 | |
Ahy18g2209 | 483 | Gene3D | - | 135 | 224 | - | - | |
Ahy18g2209 | 483 | Gene3D | - | 387 | 474 | - | - | |
Ahy18g2209 | 483 | ProSiteProfiles | Zinc finger C3H1-type profile. | 136 | 164 | IPR000571 | GO:0046872 | |
Ahy18g2209 | 483 | SUPERFAMILY | CCCH zinc finger | 305 | 330 | IPR036855 | GO:0046872 | |
Ahy18g2209 | 483 | PANTHER | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 37 | 101 | 472 | - | - | |
Ahy18g2209 | 483 | ProSiteProfiles | Zinc finger C3H1-type profile. | 228 | 256 | IPR000571 | GO:0046872 | |
Ahy18g2209 | 483 | SUPERFAMILY | CCCH zinc finger | 389 | 416 | IPR036855 | GO:0046872 | |
Ahy18g2209 | 483 | Gene3D | - | 225 | 338 | - | - | |
Ahy18g2209 | 483 | ProSiteProfiles | Zinc finger C3H1-type profile. | 302 | 330 | IPR000571 | GO:0046872 | |
Ahy18g2209 | 483 | SUPERFAMILY | CCCH zinc finger | 436 | 460 | IPR036855 | GO:0046872 | |
Ahy18g2209 | 483 | SUPERFAMILY | CCCH zinc finger | 193 | 216 | IPR036855 | GO:0046872 | |
Ahy18g2209 | 483 | ProSiteProfiles | Zinc finger C3H1-type profile. | 388 | 416 | IPR000571 | GO:0046872 | |
Ahy18g2209 | 483 | SUPERFAMILY | CCCH zinc finger | 231 | 256 | IPR036855 | GO:0046872 | |
Ahy18g2209 | 483 | ProSiteProfiles | Zinc finger C3H1-type profile. | 188 | 216 | IPR000571 | GO:0046872 | |
Ahy18g2209 | 483 | SUPERFAMILY | CCCH zinc finger | 137 | 163 | IPR036855 | GO:0046872 | |
Ahy18g2209 | 483 | ProSiteProfiles | Zinc finger C3H1-type profile. | 433 | 461 | IPR000571 | GO:0046872 | |
Ahy18g2209 | 483 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 231 | 255 | IPR000571 | GO:0046872 | |
Ahy18g2209 | 483 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 191 | 215 | IPR000571 | GO:0046872 | |
Ahy18g2209 | 483 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 304 | 328 | IPR000571 | GO:0046872 | |
Ahy18g2209 | 483 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 138 | 162 | IPR000571 | GO:0046872 | |
Ahy18g2209 | 483 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 391 | 414 | IPR000571 | GO:0046872 | |
Ahy18g2209 | 483 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 435 | 460 | IPR000571 | GO:0046872 | |
Ahy18g2209 | 483 | PANTHER | CCCH ZINC FINGER/TIS11-RELATED | 101 | 472 | IPR045877 | GO:0003729 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy18g2209 | Ahy-Chr18 | 117844865 | 117857464 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy18g2209 | 431 | 472 | C2H2 Transcription Factor Family | AT3G02830 | 48.837 | 8.37e-06 | 46.2 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C3H | Ahy18g2209 | zf-CCCH | 2.30E-11 | CL0537 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy18g2209 | - | - | gmx:100801417 | 672.544 |