Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2207 ATGGATGAATTTAGCAGTGGTGATCAAGCTCCTGAGTGGACCAGTAGCAGCAGTGACGATAGCTTTTCCTATGAGGATGAAGATTCTCATCAAGATGTTGAGAACATTGATAATGTTGAATCTAGCATAGAGAAAGATGATGACAAGGTTACTGCAACTATGCTATGGAGTTCTGAGTTTGACAAGGAGGTTCATGCCTATAAAGCTTATGTAAAGTATGCGAGAGATATGGGTTTTGCTGTCCGTAAAAGAGACTTGTCAAGAGATAAGGATGGGAATTTGAATAGAAAGTACTATGTTTGCAATCGCCAAGGGACAAGGGATCCAAAACACTATCGTCTACTTGATAGAAAGAGGAATCATAAGCCAGAGACAAGAACTGGTTGCAAGGCACGTTGTTTTATTTATTTGGATAAGTTGTCCATGAAATGGAGAGTTAAGACACTAGAAGAGGAGCACAACCATCCAATGATCCCAGAACAATTTGTTCATTTAATTTCTAACCATCGGAAGTTGACTGAGGCTGACAAAGCCCGGATTGTTTGCATGAAGGAATCTGGGTTTCAAACTTCTCAAATTGTTGGGTTTTTGGCTAAGCTTGCTAGTGGCTATAGTAACCTTAATTTCACGAAGAAGGATGTTTATAACTTTATTGATCCAGATAGGCGTGCAAAGATAGAGAACGGAGATGCTGTGGCAGCAATAAGTTATCTCCAGGGTAAGGCAGATGTGGACCCAATGTCTGTTGCTCGTTATACACTAGTCAACGGTAACAAATTGGGCAATCTTTTCTGGGCTGATGGACTTATGATCAATGACTACCAATACTTTGGAGATGTGTTAGCTTTTGACTCCACTTATAAGAAGAATAGATATAATAAACCTGTAGTGATTTTCTCTGGATCAAATAATCATCGCTTGACTTGCATATTTGGGTTTGCTGTGCTTGCCAATGAAAGTCGAGATACCTACATATGGTTGCTGAAGGAATTTTTGGATGTCATGATGAACAAGGAACCAAGTGTTGTAGTGACTGACGGCGACGATCAAATGCGACAAGCAATAAAGGAGGTCTTCCCTAGCACGACACATAGGCATTGTGCATGGCACATTGAGAAAAATGCAAATAGTCACATCAATGATCGGTCTCTTTTGGATGCTTTTAAGGTATCGATGTATGCTAATATGATGGTACCCCAATTTGAAGCTTACTGGGAAGAAATGATTCAGAAATTTGATATTGATGAGGACCACTGGCTTTTAACCAAATATGCCAATAAGGCAATGTGGGCCACTGCATACCTATGCGGAAAGTTTAGTGCAGGTGTTAGAACAACATCTCGATGTGAAGGTATAAACTCTTTCCTAAAAAGGTTTATTAAGTCACAGGAAACCTTGCTTGCGCTTGTGGAAAATCTAGAGCGCGTGGTTAAAGAGTACCGTAACAATGAACTTGTTGCTCAATTCAAGTCTATGTATAGTAAGTCAGTGCTGACTACTGGGTTGGACTCCATTAAGCAGGCTGCAGCAAGGGTTTACACTGCAGAAGTATTTCCAGAGGTGAAGGATCAACTAGCAAAAGTTGTTGCACTAAAGCATGTTGGCAAAAGTGGTATGGGCAGTAATATTGTTCATTGTGTTGCAAAATTTAGACGACTAGGTAGACTTTATCATGTTCTTCATGATGATACTTCAGAAAGGATTGAATGTGAATGTCAGCATTCACAACAAAGTGGCATACCATGCAGCCATATATTTTGTGTCATGAGACATGAGGATATTTGTGAATTGCCTGAACATTTGGTTTTAAAGAGATGGCGAAAAGAAGCAAATGCATACTTAAATGAAGAAGTTGACGATGGAAAAGACCCGAAGAGAGCGTTTGCTCTCTGGTACGGTTCCTTGTGGTCGGGGTCAATTTGGATGAACTTTCTTGTCGCAAAAACTACACCAACTTATCGCCATACAATTGGATGTGTTAATGGCATTATAAAGGATTTGGAGAAGAGGTTATGCTTGGTCGAAAACGTGAGTAGGCCAGTCAAAGATATTCAGGACCTTGAGATTGTGAAGATAAGGGGTGCGCCAAAACTCAACAAGAAATTCAAGGGATTGAAGACAAGGAACTGCTCCCGTTGTGGGCAAACTGGTCACACCCGAAGAACATGTCATAATGTAGAATCTGAAAAGCATTGTTTGACTGGAGATAATGGCTCTGAAGGCGAAGGGCATGGCAGTAGGTTTGAAACAGGACGGCATAATAGTCATGATGATGATGTCGCGGCCAAGCAAGGATCACTTTCAAGCAAGTTTGGTTTGTATAGCGCAGGTTGTGATGAAGTTGCATCAGACTCTTTGAAGAATATCTGTAAAAATTCTATTCCAAATTATATTACTGTCCCAAAATAG 2409 0.4035 MDEFSSGDQAPEWTSSSSDDSFSYEDEDSHQDVENIDNVESSIEKDDDKVTATMLWSSEFDKEVHAYKAYVKYARDMGFAVRKRDLSRDKDGNLNRKYYVCNRQGTRDPKHYRLLDRKRNHKPETRTGCKARCFIYLDKLSMKWRVKTLEEEHNHPMIPEQFVHLISNHRKLTEADKARIVCMKESGFQTSQIVGFLAKLASGYSNLNFTKKDVYNFIDPDRRAKIENGDAVAAISYLQGKADVDPMSVARYTLVNGNKLGNLFWADGLMINDYQYFGDVLAFDSTYKKNRYNKPVVIFSGSNNHRLTCIFGFAVLANESRDTYIWLLKEFLDVMMNKEPSVVVTDGDDQMRQAIKEVFPSTTHRHCAWHIEKNANSHINDRSLLDAFKVSMYANMMVPQFEAYWEEMIQKFDIDEDHWLLTKYANKAMWATAYLCGKFSAGVRTTSRCEGINSFLKRFIKSQETLLALVENLERVVKEYRNNELVAQFKSMYSKSVLTTGLDSIKQAAARVYTAEVFPEVKDQLAKVVALKHVGKSGMGSNIVHCVAKFRRLGRLYHVLHDDTSERIECECQHSQQSGIPCSHIFCVMRHEDICELPEHLVLKRWRKEANAYLNEEVDDGKDPKRAFALWYGSLWSGSIWMNFLVAKTTPTYRHTIGCVNGIIKDLEKRLCLVENVSRPVKDIQDLEIVKIRGAPKLNKKFKGLKTRNCSRCGQTGHTRRTCHNVESEKHCLTGDNGSEGEGHGSRFETGRHNSHDDDVAAKQGSLSSKFGLYSAGCDEVASDSLKNICKNSIPNYITVPK* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2207 802 Coils Coil 463 483 - -
Ahy18g2207 802 MobiDBLite consensus disorder prediction 734 760 - -
Ahy18g2207 802 Pfam FAR1 DNA-binding domain 70 158 IPR004330 -
Ahy18g2207 802 ProSiteProfiles WRKY domain profile. 84 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy18g2207 802 MobiDBLite consensus disorder prediction 734 761 - -
Ahy18g2207 802 MobiDBLite consensus disorder prediction 1 20 - -
Ahy18g2207 802 ProSiteProfiles Zinc finger CCHC-type profile. 710 723 IPR001878 GO:0003676|GO:0008270
Ahy18g2207 802 PANTHER OS02G0262500 PROTEIN 52 614 - -
Ahy18g2207 802 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 52 614 IPR031052 GO:0006355
Ahy18g2207 802 Pfam MULE transposase domain 280 374 IPR018289 -
Ahy18g2207 802 MobiDBLite consensus disorder prediction 1 44 - -
Ahy18g2207 802 ProSiteProfiles Zinc finger SWIM-type profile. 557 593 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2207 Ahy-Chr18 117736764 117739283 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy18g2207 MULE 2.10E-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2207 - - aip:107611415 1646.71