Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2178 ATGGCTGAAGCTTTAGTAGCAGGATCATTTCTATCTGCTTCCGTGCAGACTTTATTGGAGACAATAACCTCAGTGCAGTTCCAAGACTTCTTCAGGAAGACATGGAATCTGAATGAATCAATCTTGGATGAGTTGGAAACTACGTTGTTGACTCTTCAGGCTGTCCTCAATGATGCAGAACAGAAGCAGATTACCAACCCTTCAGTCAAAGAATGGCTTCAGAGGCTAAAAGATGCAGTGCATGAAGCAGAGGACTTGTTAGATGAAGTCAACACTGTGGCATTAAGGCACAATTTGGAGGATCAGCATCCACATCAATCTGTTGCCGGCAAGGTAAGGAGATTTCTTTGTTCTGGTTTTCGGTTTCACAGGGATATGAACTCAAACTTAGAGGCCTTGTGCCGAAGGCTTCGACTATTTGCTGCACAGAAAAATGGTCTTGGCTTGCAACTTGTTAGCATGAGGGTGTTGGTTAGAGCACCAACAAGTTCTGTGGCAAATGAGTTGGGTGTAGTTGGTAGAGATGGTGATAAGGAAAAATTGATGAGTTTTCTGTTAACAAATGATGCAAACGGCAACAATAACAGAATAGGGGTGATTACAATTTTTGGCATGGCTGGTGTTGGCAAAACCACCCTTGCACAGCTTTTGTACAATGATCCTAGAGTTGAAGAGAATTTTGATCTGAAAGCATGGACATCTGTTTCTGAAGTATTTGATGCCACTGTGGTAACAAAAGCCCTTCTGGAGTCACTGGCTTGTAAGCATTTTGAAGGCGATAATCTAGATTTTCTCCAAATTGAATTGAGGCAAATGGTTAAGGGGAAAAAGTTCTTGTTTGTGTTGGATGATCTTTGGAATAATAAATATGTGGAGTGGGATCACTTGCGAGCGCCTTTTAGTGAGGGAAAACAAGGGAGTAGGATCATCATCACAACTCGCCAAAGAGATGTTGCTAAAATGACACACACATTCCCAATTTACCATTTAGAACCATTGTCCCATGAAGATTGTTGGTCACTGCTGTCCAAGCATTCATTCGAAAACACTGATCCTAGAAGACAACCCAGGTTGGAAATGATTGGCAGAAAAATTGCAGACAAGTGTGGTGGCTTACCTATAGCTGCAAAGACATTAGGAGGCATTTTGAGGTCCAAAGTGGATGAAAATGAATGGACCAATATTTTAAATAGTAACATCTGGGAGCTACTAAACGATGATATTCTACCTGCTCTTTGGTTAAGCTATATCTATCTCCCTGCTTGTTTAAAAAGATGTTTTGCTTATTGTTCAATTTTCCCGAAAGGGTATCCTCTGAATAAGAAACACGTAGTACTACTTTGGATGGCAGAGGGTTTGCTCCAACAAGGCCAGGAGAAATCAATGGAAGAAATGGGTAATCAATATTTTGATGAGCTATTGTCAAGATCAATAATTCAACAAGAGGGAGAGTGTTATGTAATGCATGACTTAATCAATGACTTGGCCACAGTTGTGTCAGGAAAGAGTTGTAACAGGTTTGAGGGCTCTGAAATAACAGAAAGCGTCCGGCACTTTTCCTATTCCAGAGGTAAGTATGACTCTTCGACCAAATTTGAAAGTTGTTATAGAGCAAAATGCTTGAGGACGTTCCTCCCAATGCCGTTGACTGATGATCCAACTTTATGGTGGTATTGGAAGCATTACCTGACCAAAAGGATCACACATGATTTCCTGCTCAGACAAAGACGCCTGCGAGTGCTATCATTGGCGAACTATGATAACATCAATGAATTGCCTAATTCAATAGGTAATTTGTTACACTTGAGGTTCTTGGACCTCTCTTTTACTCCAATCAAAAGGCTGTCTAGTGCAATATTTAAGCTTTATAATCTTCAAACATTGAGATTGTTATACTGTCAGAACCTCAGTGAATTGCCTGCAGACATAGGAAACTTGGTTAAGTTGCGTCATCTCGATATCACTGGCACGAAGTTGAAGATGTCAAGACAGATAACAACCTTACAACACCTCCAAACCCTGAGTACTTTTGTTGTTGACAAACAATGTGAGGGACTAAAGCTTAAAGATATGCGATGCTTCCCGAAACTGCAGGGAAAACTATCAATCATGGAACTGTGCAATGTGGATCAAACAATAGATGCACTTGAAGCAAACTTGAAGAACAAACAGTTCATCGAGGAGTTGGTGTTAGATTGGAGCAAGCAAGCTGATCAAGGTTTAGGAACTGAAACTGAGGTCCTTGAGCATCTGCAGCCATCAAGAAACATAAAGAAGTTCATCATAGAGTCCTACAATGGAACCAAATTCCCAAGTTGGTTTGCAGATTCTTCATTTTCGAATATTGTGTTCTTGTCTATTAGTGGCTGCAACTATTGCTTATTTCTCCCACCACTTGGACAACTGCCTTCTCTCAAGGAACTTTATGTTACAAGGATGAAAACGATAAAGATTATTGGTCCTGAGTTTTATGGTACTTCTAGTTCTTCCTCTCCTTTTCAACCATTTCCATCCCTTGAGATCTTATCATTTGAGGAAATGCTAGACTGGGAGGAATGGCATGTGTTCAGTATAGAAGGCTTAGAGTTCCCTTTTCCATCTCTTAAGCATCTACGTTTGTACAATTGTCCTAAGCTGAAGGGTCATTTACCGCGCCATCTTCCTTCTAGTTTGACTGATGTTAACATATCATACTGTGATCAATTGGAAGCATCTACTCTACATTGGATTGCATCAACTAAAAGTTTGACTATCATTGATGGGGGTCAACATCTTTTGCCAATCCTTGAGACAGATTCGCAGTGCTCGCTGTCCTACATGAAGATCGAAAGGAGTGATAGGCTGACATCTTTTCCCAGAATGGTTCTTAGCAGCCATTGTCTCAGTGACTTGTATCTTACCAAAGTTCCATCTTTTACCTCTTTCCCAACCGAAAGCATGCCGTCTTTGCGAACATTAATGCTATCAGAATGCAAGAATTTGGAATTCCTACCTGATGAAGCTTGTAGGAATTACAGTTCACTTGAGAATTTGATGATTTGGGATAGTTGTCACTCTCTCAGTTGCTTTCCATTTGGATCTCTCCCTGTACTCAAATATCTTCATATTTGGGGCTGCCCCAATCTCATATCAATTTCTTTTTCAAGTGTTGACAGTTATGCACAAAATTTGTCAAATCTTCAAATATTGAGAATAAGCAACTGTCCTAATCTGGAATCATTTCCTCAAGGTGGATTGTCCACTCCCAACCTAATGGAATTCAAGGTCATTAATTGTGGGAAGCTAAACTCACTACCGGAACGGATGAACATTCTCTACGCTCTTCAAGATTTAGATATCTCTAATGTTCCACAACTTGTGTCATTTCCTCAAGGTGGCTTGCCGCCGAAGCTACGATCCGTGTTCATAGGCTTTTGCAAAAGTCTATCACCCGTGGCTATATCTGAGTATGGTTTCCAGTGGCTCAGTTCTCTTTTGAAGCTTGGAATTGGAGGTGATGATCTTGTTCAATCATTCCTGGAAGAAAATTCAAATGCATTTCAACATCTCACCATTCTTCAAGAGCTTCACATCCTAAGGTGTTCAAAGATTGAGTCCTTGCCTGAAGACAGGTTACCTTCCTCTCTTTTATTATTGAGGATTCAGGATTGTCCCCTTCTAGAAGCAAGGTACAATAATAGGAGAAAGACACATTTCTCTAAGATTTCTCACATACCTACCATAAGAATAAATGAAGATGTCATAATATAA 3750 0.4029 MAEALVAGSFLSASVQTLLETITSVQFQDFFRKTWNLNESILDELETTLLTLQAVLNDAEQKQITNPSVKEWLQRLKDAVHEAEDLLDEVNTVALRHNLEDQHPHQSVAGKVRRFLCSGFRFHRDMNSNLEALCRRLRLFAAQKNGLGLQLVSMRVLVRAPTSSVANELGVVGRDGDKEKLMSFLLTNDANGNNNRIGVITIFGMAGVGKTTLAQLLYNDPRVEENFDLKAWTSVSEVFDATVVTKALLESLACKHFEGDNLDFLQIELRQMVKGKKFLFVLDDLWNNKYVEWDHLRAPFSEGKQGSRIIITTRQRDVAKMTHTFPIYHLEPLSHEDCWSLLSKHSFENTDPRRQPRLEMIGRKIADKCGGLPIAAKTLGGILRSKVDENEWTNILNSNIWELLNDDILPALWLSYIYLPACLKRCFAYCSIFPKGYPLNKKHVVLLWMAEGLLQQGQEKSMEEMGNQYFDELLSRSIIQQEGECYVMHDLINDLATVVSGKSCNRFEGSEITESVRHFSYSRGKYDSSTKFESCYRAKCLRTFLPMPLTDDPTLWWYWKHYLTKRITHDFLLRQRRLRVLSLANYDNINELPNSIGNLLHLRFLDLSFTPIKRLSSAIFKLYNLQTLRLLYCQNLSELPADIGNLVKLRHLDITGTKLKMSRQITTLQHLQTLSTFVVDKQCEGLKLKDMRCFPKLQGKLSIMELCNVDQTIDALEANLKNKQFIEELVLDWSKQADQGLGTETEVLEHLQPSRNIKKFIIESYNGTKFPSWFADSSFSNIVFLSISGCNYCLFLPPLGQLPSLKELYVTRMKTIKIIGPEFYGTSSSSSPFQPFPSLEILSFEEMLDWEEWHVFSIEGLEFPFPSLKHLRLYNCPKLKGHLPRHLPSSLTDVNISYCDQLEASTLHWIASTKSLTIIDGGQHLLPILETDSQCSLSYMKIERSDRLTSFPRMVLSSHCLSDLYLTKVPSFTSFPTESMPSLRTLMLSECKNLEFLPDEACRNYSSLENLMIWDSCHSLSCFPFGSLPVLKYLHIWGCPNLISISFSSVDSYAQNLSNLQILRISNCPNLESFPQGGLSTPNLMEFKVINCGKLNSLPERMNILYALQDLDISNVPQLVSFPQGGLPPKLRSVFIGFCKSLSPVAISEYGFQWLSSLLKLGIGGDDLVQSFLEENSNAFQHLTILQELHILRCSKIESLPEDRLPSSLLLLRIQDCPLLEARYNNRRKTHFSKISHIPTIRINEDVII* 1250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2178 1249 SMART LRR_typ_2 980 1004 IPR003591 -
Ahy18g2178 1249 SMART LRR_typ_2 599 622 IPR003591 -
Ahy18g2178 1249 SUPERFAMILY L domain-like 487 918 - -
Ahy18g2178 1249 Gene3D Ribonuclease Inhibitor 560 926 IPR032675 -
Ahy18g2178 1249 Gene3D - 14 131 - -
Ahy18g2178 1249 Gene3D Ribonuclease Inhibitor 935 1127 IPR032675 -
Ahy18g2178 1249 Gene3D - 332 414 IPR042197 -
Ahy18g2178 1249 Gene3D - 157 325 IPR027417 -
Ahy18g2178 1249 PRINTS Disease resistance protein signature 272 286 - -
Ahy18g2178 1249 PRINTS Disease resistance protein signature 369 383 - -
Ahy18g2178 1249 PRINTS Disease resistance protein signature 199 214 - -
Ahy18g2178 1249 PRINTS Disease resistance protein signature 978 994 - -
Ahy18g2178 1249 CDD RX-CC_like 13 138 IPR038005 -
Ahy18g2178 1249 Pfam Rx N-terminal domain 12 102 IPR041118 -
Ahy18g2178 1249 Gene3D - 415 498 IPR036388 -
Ahy18g2178 1249 Coils Coil 69 93 - -
Ahy18g2178 1249 Pfam NB-ARC domain 194 397 IPR002182 GO:0043531
Ahy18g2178 1249 SUPERFAMILY L domain-like 862 1222 - -
Ahy18g2178 1249 Coils Coil 42 62 - -
Ahy18g2178 1249 PANTHER - 50 956 - -
Ahy18g2178 1249 PANTHER DISEASE RESISTANCE PROTEIN RP 50 956 IPR044974 GO:0006952
Ahy18g2178 1249 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 430 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2178 Ahy-Chr18 116697946 116701965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2178 197 675 WRKY Transcription Factor Family AT5G45050 23.643 4.31e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2178 - - adu:107462840 2375.51