Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2169 ATGGCTGACCCACCTCCACCCAAGCGCCATAAAATTGTCAGAGGAGATGATGATTATATGCCCGGAAACATTCTTGAGATTGAGCTTTCTAAGTTTATGACCTTTGATCACGTGAAATGCAAACCTGGGCCTCGATTGAATCTTGTAGTTGGACCCAATGGTTCTGGAAAAAGTTCTCTCGTGTGTGCTATTGCACTTGGCCTTTGTGGAGAGCCTCCGTTGCTTGGGCGAGCAACTAGTGTCGGGGCATATGTGAAGCGGGGAGAGGAGTCTGGATCCATTAAGATTACATTGAGAGGGAATAACAAAGATGAGTGTATTGCCATTACTCGCAAAATAAATACTAACAACAAGTCTGAGTGGTTGTTAAATGGGAATATAGTTCCCAAAAGTAATGTAGCTGAAACTGTTAAAAGGTTTAACATCCAAGTCAGTAACTTGACTCAATTTTTACCGCAAGACAGGGTCTGTGAGTTTGCAAAGTTAACTCCAGTGCAGCTCCTGGAAGAAACTGAAAAGGCTGTAGGTGATCCACAACTTCCCGAGCAACATCGTGCACTAGTTCATAAAAGTTATGCATTGAAGAATATTGAAGTGTCTAAGGAGGGGCATTTAGGTACCTTGAATCTGTTGAAGAAACAAAATGCTGAACTAGAGAAGGATGTTGAGCGTGTCCGTCTAAGAGATGAGATTCTTGCCAAGGCTGAAACCATGAAAAAGAAATTGCATTGGCTTGAATATGACATGAAGAAGGCTCAATATTGGGAAGCTAAGCAACATGAGAATAATGCGGCAAAGGCAATGGAGGAGTCTGCAAAGTTACTAAATGATCTTAAGGATCCTATTAACAAACAGAAGGAGGAACAGACTGCACTAGATGCCAAATGGAAAAAGGTTGACAGCCGTATAAAAGAGAACTACAAGAAGCGGTCAGAACTTCTAGATAAAGAGAGCCAACTGGATGTGGAGATGCAAAGGAATTACAAGGATATGGAAGATTTGAGAAGACAGGAGGAAACTTGGCAAAAAAAACTTGAAAAAATTAGGGAGGAACTTGCTGCTTCTGAACTTGAACTTGAGAATCTAGGTCCTTCCGAACCTCGTCAACAAGAAGAGCTGCAAAGACTAAGAGCTAAAGCCTCTGATATTGATTATGAAGCTAAGCAAGTGATGAATCCTCGCATATCACAACTAGAGAGGGAAATAAGTTGTAAAGTGACATCCTTGAATGAATGTAAAAAAAGGTTGAGCGAAATGAACAATAAAATTACAAAATGTTTGCATGTATTGCAAAAAGCAGGGGCAGACAAAATTTTTGAAGCCTTTAAATGGGTCCAAGAACATCGTAAAATCTTCAATAAGGGGGTTTATGGCCCAGTATTATTAGAGGTGAATGTCTCAGATCAAGATCATGCTGCTTATCTAGAGGGTCAAGCTGCGCAATATATTTGGAAGTCTTTCATAACACAAGATCCTCGTGATCGGGACCTCTTGGTGCAGCACCTAAAGTTCTTTGATGTTCCAGTTTTAAATTATACCGGTGAAGTTGACCAACAAAGAGAGACTTTCAGAATTACTGAAGATATGCATGCCCTTGGCATTCACTCCCGGCTGGACCAAGTTTTTGATGCTCCTAGTGCTGTCAAGGAGGTTTTGATTCGCCAGTTTAATTTGGATCATTCTTATATTGGATCCAAAGATACTGATAAGAGGGCTGACGAGGTTCCAAAATTGGGAATTATAAATTTGTGGACACCGGAAAATCACTACCGGTGGTCTAAGTCTAGATATGGGGGTCATATCTCAGCCATGGTTGAACAAGTGGGAGATCCAAAGTTTATAGTGAATAGTTCAAATGCGGGAGAAATTGAGAAGCTGGAATCCCGGGAAAAGGATCTTGAAGGAAGTATTGCTACCTTGGAAGAAGATGCTAAAAGATCTCGAGATAAGCTAAAGGCCTTAATTAATGAATATGCTGATCTTCGTAGAAAGATGGAGGAGATTAATAAATTATTTCAACTAGAGAAACAAAAACGTGAAGGTATTCACAACCGTATTGGGAAAAAGAGAGCTGCACTGAAATCATTGGAGGAACCCATTGATAGAGATACTGAGATGGCAAAGCTTGTTGATCAGGCAAATAAACTTCACATTCTGAGATTCCGTAATGCAATGAAATTAAAGCAACTTCTCGTTGAGTGTGTTGCTTACAGAAGAAGCTTTATTGAACAACGGATGTCTTCGATTCAATTTGATGCTGAGATTCGAAAATTGGAGGCAGATTTAAAGCAGCATGAGAGGTCTGCCATTGAAGCAACTATACAATTTCAGAACCTTAAGAAAGAGACTGAGGCTTGTGAACGGCAGCTGACGGATTCTTTGAATCAAGCTGAATCAATTGCACCATTGACACCTGAGCTACAGAACGAATTTCGTGAGATGCCCACTACAATTGAGGATTTAAGTAATGCTATTCAAGAAACAATCTCTGAGGCCCGGGCAATATTTACACTTAATAATAATGCATTGGAGGAGTATGAGTATCGGCGACAAAAGATAGAAGAACTTGCAGAGAAAATTGCTGCAGAGGAGGAAGAATATGGAAGGTCTTCTACTGAAATAAAGGAAATTGAGGATAAATGGCTTCCAGCACTTCGAAACCTTGTGGCACTGATCAATGAAACTTTTAGCCGTAATTTTCAAGAGATGGCTGTTGCTGGTGAAGTTTCACTAGATGAGCATGATAAGGAGTATGCCCAATATGGAATTTGTATTAAAGTCAAATTCAGACAAAATGGAAAACTTGAAGTTCTTAGTGCTCATCATCAATCTGGAGGGGAGCGGTCAGTTTCAACTATCGTATATCTTCTTTCCCTTCAAGATCTTACAAATGTCCCATTTAGAGTTGTTGATGAAATCAACCAGGGCATGGACCCAATAAACGAAAGAAAGATGTTTCAGCAACTGGTCAGAGCTGCAAGCAAGCCGAATACACCACAGTGTTTCTTGCTTACCCCCAAATTGCTACCAGACCTGCAATATAGTGAAGCATGCACTATATTGAACGTGTTTAATGGCCCTTGGATTCCCCAACCCTCAAAGCTATGGGAGGAAGGTGAACGATGGAGTATTGTCACCGGTCTCTTGGGGGAAACCCATTGTTGA 3165 0.4063 MADPPPPKRHKIVRGDDDYMPGNILEIELSKFMTFDHVKCKPGPRLNLVVGPNGSGKSSLVCAIALGLCGEPPLLGRATSVGAYVKRGEESGSIKITLRGNNKDECIAITRKINTNNKSEWLLNGNIVPKSNVAETVKRFNIQVSNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPEQHRALVHKSYALKNIEVSKEGHLGTLNLLKKQNAELEKDVERVRLRDEILAKAETMKKKLHWLEYDMKKAQYWEAKQHENNAAKAMEESAKLLNDLKDPINKQKEEQTALDAKWKKVDSRIKENYKKRSELLDKESQLDVEMQRNYKDMEDLRRQEETWQKKLEKIREELAASELELENLGPSEPRQQEELQRLRAKASDIDYEAKQVMNPRISQLEREISCKVTSLNECKKRLSEMNNKITKCLHVLQKAGADKIFEAFKWVQEHRKIFNKGVYGPVLLEVNVSDQDHAAYLEGQAAQYIWKSFITQDPRDRDLLVQHLKFFDVPVLNYTGEVDQQRETFRITEDMHALGIHSRLDQVFDAPSAVKEVLIRQFNLDHSYIGSKDTDKRADEVPKLGIINLWTPENHYRWSKSRYGGHISAMVEQVGDPKFIVNSSNAGEIEKLESREKDLEGSIATLEEDAKRSRDKLKALINEYADLRRKMEEINKLFQLEKQKREGIHNRIGKKRAALKSLEEPIDRDTEMAKLVDQANKLHILRFRNAMKLKQLLVECVAYRRSFIEQRMSSIQFDAEIRKLEADLKQHERSAIEATIQFQNLKKETEACERQLTDSLNQAESIAPLTPELQNEFREMPTTIEDLSNAIQETISEARAIFTLNNNALEEYEYRRQKIEELAEKIAAEEEEYGRSSTEIKEIEDKWLPALRNLVALINETFSRNFQEMAVAGEVSLDEHDKEYAQYGICIKVKFRQNGKLEVLSAHHQSGGERSVSTIVYLLSLQDLTNVPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACTILNVFNGPWIPQPSKLWEEGERWSIVTGLLGETHC* 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2169 1054 Pfam RecF/RecN/SMC N terminal domain 24 995 IPR003395 -
Ahy18g2169 1054 Coils Coil 201 228 - -
Ahy18g2169 1054 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 1005 IPR027417 -
Ahy18g2169 1054 Coils Coil 623 678 - -
Ahy18g2169 1054 Coils Coil 748 796 - -
Ahy18g2169 1054 Gene3D - 23 204 IPR027417 -
Ahy18g2169 1054 Gene3D - 849 1017 IPR027417 -
Ahy18g2169 1054 Coils Coil 257 277 - -
Ahy18g2169 1054 Coils Coil 331 358 - -
Ahy18g2169 1054 CDD ABC_SMC5_euk 927 1029 - -
Ahy18g2169 1054 CDD ABC_SMC5_euk 22 179 - -
Ahy18g2169 1054 Coils Coil 839 880 - -
Ahy18g2169 1054 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 18 1050 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2169 Ahy-Chr18 116377579 116401974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2169 8 1043 Structural Maintenance of Chromosomes family AT5G15920 55.780 0.0 1137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2169 K22803 - gmx:100778678 1437.94