Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2162 ATGCCCAAATCTCGTAACTCTTATACCCCCAACCATGAAAATAGCATTGGTGATGGTGGTGCTATTAAGAGCTTTAACGTTACCCTTTCACCTCTTTCTTCACCCAATTCTGCTTGTGATGACACTACCACCACCATCAGTGATCCGCATTACCCATTAACAATTAATGGTAGTAATAATAGTGAACCAATGAGTGAGATTAACCAACTTGACCTGAATCAAAAGTTGAAAGGAAAGAAAACAAATGCATATGGTAATAATGATGATGTGAATCCTAGTTTCATTCATCGTGCATCATCGTCATCATCCAGAGGTGCAGATCTGAGTGATCATGCAGCAAAAGAGATGTTGAAAACTTATCCAGTTGAACATGCATGTCCAACGAAGGAGAGTCTGATTTGGATGCAACAAAATCTTCAAAGGTATGATGATGATTTTCCCTTTAAAACATTTTATGGGTCTTCTGGTTATGAAAAATTCTTTGAGAAAGTGGTGTTGAAGCCACAAGGAGGAGTAGGAAGAGGAATAAGAATAGTTACTCACAATGATAACAGTAACAACGAACCAATTAGAAACAACATCAATCCGCAGCACCATCATATAGATGATCCAGATAATAATAATCAAAAGAAGGTAATTGATGATGTTTTAGTTAATGATGGTGAGGATGGAAGAATCCAGAGCCTTCCTTACAAGAAAAATAGGCCATACACATGTTCAAAGTGTATGGCGGTGTTCGAAACATCACAAAATTTTGCAGCTCATATAAGTTCTCACTACAAGCATGAGAGTAGGGCTGAGAGAATGAAGAGACAAATGGCCAAAATGATGCGTAGAAGCAAAAAAAGGACCGTCCTTGAACATCAGCAACAACATATCAAGAATTTTAGAGGAGGAGGAGGAGGATCTGCTTTGCAGGTGAACGTGGAAGATCAAGCCCATCATAATAATAATTATGATGCTCCTCCTGGTTTTGATGTTCGTTTATCTGTTGCTATCTTGCCCAAATCTCGTAACTCCTATAGCCCCAACCATGAAAATGGCATTGGTGATGGTGGTGCTATTAAGAGCTTTAACGTTACCTTTTCACCTCTTTCTTCACCCAATTCTGCTTGTGATGACACTACCACCACCATCAGTGATCCGCATTACCCATTAACAATCAATGGTAATAATAATAGTAAACCAATGAGTGAGATTAACCAACTTGACCTGAATCAAAAGTTGAAAGAGAAGAAAACAAATGGATATGGTAATAATGATTATGTGAATCCCAGTTTCATTCATCGTGCATCATCGTCATCATCCAGAGGTGCAAGTATGAGTGATCATGCAGCAAAAGAGATGTTGAAAACTCATCAAGTTGAACATGAATTTCCAACGAAGGAGAGTCTAAGTTGGACGCGACAAAATCTCAAAAGGTATGATCATGATTTTCCCTTTAAAACAATTAATGGGTCTTCTGGTTATGAAAAATTCTTTGAGAAAGTAGTGTTGAAGCCACAAGGAGGAGTAGGAAGAGGAATAAGAATAGTTACTCACAATGATAACAGTAACAACGAACCAATTAGAAACAACATCAATCCGCAGCACCATCATCTAGATGATCCAGATAATAATAATCAAAAGAAGGTAATTGATGATGTTATAGTTAATGATGGTGAGGATGGAAGAATCTAG 1680 0.378 MPKSRNSYTPNHENSIGDGGAIKSFNVTLSPLSSPNSACDDTTTTISDPHYPLTINGSNNSEPMSEINQLDLNQKLKGKKTNAYGNNDDVNPSFIHRASSSSSRGADLSDHAAKEMLKTYPVEHACPTKESLIWMQQNLQRYDDDFPFKTFYGSSGYEKFFEKVVLKPQGGVGRGIRIVTHNDNSNNEPIRNNINPQHHHIDDPDNNNQKKVIDDVLVNDGEDGRIQSLPYKKNRPYTCSKCMAVFETSQNFAAHISSHYKHESRAERMKRQMAKMMRRSKKRTVLEHQQQHIKNFRGGGGGSALQVNVEDQAHHNNNYDAPPGFDVRLSVAILPKSRNSYSPNHENGIGDGGAIKSFNVTFSPLSSPNSACDDTTTTISDPHYPLTINGNNNSKPMSEINQLDLNQKLKEKKTNGYGNNDYVNPSFIHRASSSSSRGASMSDHAAKEMLKTHQVEHEFPTKESLSWTRQNLKRYDHDFPFKTINGSSGYEKFFEKVVLKPQGGVGRGIRIVTHNDNSNNEPIRNNINPQHHHLDDPDNNNQKKVIDDVIVNDGEDGRI* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2162 559 MobiDBLite consensus disorder prediction 515 543 - -
Ahy18g2162 559 MobiDBLite consensus disorder prediction 1 62 - -
Ahy18g2162 559 ProSitePatterns Zinc finger C2H2 type domain signature. 239 259 IPR013087 -
Ahy18g2162 559 MobiDBLite consensus disorder prediction 26 62 - -
Ahy18g2162 559 MobiDBLite consensus disorder prediction 528 543 - -
Ahy18g2162 559 ProSiteProfiles Zinc finger C2H2 type domain profile. 237 264 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2162 Ahy-Chr18 116036475 116040486 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2162 223 282 C2H2 Transcription Factor Family AT2G18490 60.000 1.66e-16 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy18g2162 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2162 - - ahf:112770316 1113.21