Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2141 ATGACAAGGTTGGATACTGAGGAAAGTAGTAGGGTAGCAGATGATGCAAAAGATCAAGGATCTAGTTCAGCAACTGTGAGGTCAGTTGAAGAACCAAATAGTTCCAATCGCTGCGAGGCAGGGGTAACAACAGAAGATTTGGCTATTGCTGAGTTCGATTCAGTTGAGGAGGCATATGTAAGGTATGTGGAATATGCACGGGTTACCGGGTTTGCGGTTCGAAAGGGAGATTCGGGAAGAGATAATGAAGGTAATGTTGTGAGAAAATTTTTCTTCTGCAACAGAGAAGGATTGCGCGATAAGAAACATTACGAGAGGATTGATAGACAGCGGGCACACAAACCAATTACAAGAACCAATTCTAATGCTAGGTTTCTGGTTCATCTAGACAAGGGTTGTGGAAAGTTGAATATGAAGTCTTTCGTTGTGGATCATAACCATGAACTAGCCCCAGCAGACCACACAAATGTAATGGCACCACATCGGCACATGTCGGAAGGTGACAAGGCCCATGTTCATAGCTTGCATGAAGCAGGTTTCCAGACAACCCAAATCATGGGATTCTTTGCCTATCTCGCAGGTGGTTATCGCAATTTGCATTTTATAAAGAAGGATCTATATAACTATATCGATGATGTTCGACGTTCCCGCATAGTGGAGGGTGATACTGCTGCGGCCATTAGCTATCTTAAAGGGAAGATTGAACTTAATTCCCTAGTTGTGGTACAATACTCGTACTGTGCTGAGAACCATTTGGGTAATCTGTTTTGGTGTGATGGTCAAATGCAGCATGACTATGATTGTTTTGGTGATGTCTTGGCCTTTGACTCAACCTATAGAAAGAATTTATACAATAGGCCTTTGGTGATTATTTCAGGTACTAACCATCATAGACAAACCATTATATTTGGGTTTGGGTTGCTTGAGGATGAGAAGATTCCTTCTTATAAATGGTTGCTAAGGAGTTTTTTGGATGTAATGAGGCAAAAGGAGCCGATGGTTGTGGTTACTGATGGAGACAAATCAATGAAGAAGGCTATCCGGAGCGAGTTTCCTAATGCAACACACAGACCATGTAGTTGGCATCTTGCTTGGAATGTTGTCTCTAATATTAAGGATGCTAATTTCTGTAGTGCATTCAAGACTGCGGTGTATGGAAACTTTGTGGTTGAAGAGTTTGAGAACTATTGGGCGGAGATGGTTGAGAGCTTTGGTTTAGAGAATAATGATTGGATTGAAAAAACATACGAGAAGAGGGCGCAATGGGCGAACGCCTATCTGTGTGATAAGTTTTGTGCTAGAGTTAGAACAACATTGAGATGTGAGGGAATCAATTCATCCCTCAAGAAGTTTATTAGATCTGGAAATTGTCTACTTGAGCTCGTGGAGAACCTGGATCGTGTGGTGAAGGATTATCAGAATAATGAGTTCATGGCCGACTTCAAATGCTTGTATTCGGAACCGGTGATGACAACAGGGTTGGAAAGTATTGAGAAGGCTGTAAGCAAGGTGTATACGCGAGAAATATTCTTTGAGGTTAAGAAACAAATAGAGTCAGTTGCTGCATTGCTCGTGCTTCATCATGAGACTTATGGTACCATTCAAAAGTTCATGCTAAGGAAGTTCCGAAGGCCCCTTCGAGTTTATACTATTTTATACAATAGCAGTTCCAAAAATTATGAGTGCTCGTGCAAGTTGTGGAACAGTCTAGGGGTCCCTTGTAGTCATATATTTTGTGCGATGAAGGAACTTGAGATAGAGGCATTGCCAAGGCGATTAGTGCTTCGCAGGTCGTGTAAAGATGCAAAAACATTGGAGAAAGTTGGTGCGGTTCCAATGGCCGATCCGGAAAAGGCGTTTCGGGAACGTTATGGGTCCATGTGGAGTGCATTGGCAAAACTGACGAAGGAAATTGAGTCAGCGGGCCCACGAGGCGGAAGGAACCGATTTAGGAGAGCAGGCGATGACCATGTCAACATGCTGGATCCAACTATTGTAAAGTCGAAGGGTGCTCCCAGGGGCAGCACGAACGCAAAAATAGGAAGGCGATGTAGAAGGTGTAATGGGCTTGGGCACGACCGTAGGAATTGTACTGCGAGGAACGAACAACCAGATGATGAGGTAGTAGGAACTATGAACGGCCAGTATCAAACTTCTTGTAAAAGGGTTTGA 2172 0.4328 MTRLDTEESSRVADDAKDQGSSSATVRSVEEPNSSNRCEAGVTTEDLAIAEFDSVEEAYVRYVEYARVTGFAVRKGDSGRDNEGNVVRKFFFCNREGLRDKKHYERIDRQRAHKPITRTNSNARFLVHLDKGCGKLNMKSFVVDHNHELAPADHTNVMAPHRHMSEGDKAHVHSLHEAGFQTTQIMGFFAYLAGGYRNLHFIKKDLYNYIDDVRRSRIVEGDTAAAISYLKGKIELNSLVVVQYSYCAENHLGNLFWCDGQMQHDYDCFGDVLAFDSTYRKNLYNRPLVIISGTNHHRQTIIFGFGLLEDEKIPSYKWLLRSFLDVMRQKEPMVVVTDGDKSMKKAIRSEFPNATHRPCSWHLAWNVVSNIKDANFCSAFKTAVYGNFVVEEFENYWAEMVESFGLENNDWIEKTYEKRAQWANAYLCDKFCARVRTTLRCEGINSSLKKFIRSGNCLLELVENLDRVVKDYQNNEFMADFKCLYSEPVMTTGLESIEKAVSKVYTREIFFEVKKQIESVAALLVLHHETYGTIQKFMLRKFRRPLRVYTILYNSSSKNYECSCKLWNSLGVPCSHIFCAMKELEIEALPRRLVLRRSCKDAKTLEKVGAVPMADPEKAFRERYGSMWSALAKLTKEIESAGPRGGRNRFRRAGDDHVNMLDPTIVKSKGAPRGSTNAKIGRRCRRCNGLGHDRRNCTARNEQPDDEVVGTMNGQYQTSCKRV* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2141 723 MobiDBLite consensus disorder prediction 1 40 - -
Ahy18g2141 723 SMART 26again6 560 587 IPR006564 GO:0008270
Ahy18g2141 723 Pfam FAR1 DNA-binding domain 62 150 IPR004330 -
Ahy18g2141 723 MobiDBLite consensus disorder prediction 1 15 - -
Ahy18g2141 723 ProSiteProfiles Zinc finger SWIM-type profile. 549 585 IPR007527 GO:0008270
Ahy18g2141 723 MobiDBLite consensus disorder prediction 16 40 - -
Ahy18g2141 723 Pfam MULE transposase domain 272 364 IPR018289 -
Ahy18g2141 723 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 47 603 IPR031052 GO:0006355
Ahy18g2141 723 PANTHER OS02G0262500 PROTEIN 47 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2141 Ahy-Chr18 115288005 115290366 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy18g2141 MULE 4.60E-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2141 - - ahf:112770305 1486.47