Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2130 ATGTCATCGACGACTACACCATGCGCTGCATGTAAGTTCCTTCGTCGGAAGTGCACACCGGAGTGCATTTTTGCACCGTACTTCCCAGCGAACAACCCACAGCGCTTCGAATGTGTCCACCGTGTCTTCGGCGCCAGCAACGTCGGCAAGATCCTCAACGAGCTACCTCCATCCCAGCGCGAGGAAGCGGTGGAGTCCCTTGCGTTCGAGGCGGAAGCACGCCAATGCGACCCGGTCTATGGCTGCACCCTCCAAGTCTGCATCCTACAGAAGAAACTCCGCCAGAGACGTGCCCTCCTCGCTAATGCCAAGAGAGAACTTAGCGCCTACATCAACCCACAAGCCATTCAAGGTCCATTCAACCCTCAGGAAAAGCCTCTGTCTTCACCTGCCGACCATTTAGGTCCTCCCTGCAGTCCGAATGTTGTACAGTATTCACCCATTTTAGGCCCATCCTACGGTCTAGATGTTGTACAGTCTTCAGCCCATTTGGGCCTATCTGACTGCCCAGATGATGCACCGTTTTTTATGCCAGCTATACAGCATAATGGGTCATTGGGTGGTGGTGGTGCTGCTGACCCGAAGCTGGACCCAGGGCAGCAAGAGTTGTTGGAGGCCCAGCAACTTGCTGCTGCTGCGGCAATCCGAGAACAGCAGCAAGCTATAATGATGAGGAATTATGTCCAGCAACAGCAACAGGAGTATCTAAGACACAATGCTGCTGCTGGGATTGAACCTGTTGCGGCTGCGGCGGCCCTACGGCGATGTCAGTGGATGTGGAGTGTTTGGCCACATGGGTGCATCTTCAGGTGGTCAAGGAGGTGA 825 0.5467 MSSTTTPCAACKFLRRKCTPECIFAPYFPANNPQRFECVHRVFGASNVGKILNELPPSQREEAVESLAFEAEARQCDPVYGCTLQVCILQKKLRQRRALLANAKRELSAYINPQAIQGPFNPQEKPLSSPADHLGPPCSPNVVQYSPILGPSYGLDVVQSSAHLGLSDCPDDAPFFMPAIQHNGSLGGGGAADPKLDPGQQELLEAQQLAAAAAIREQQQAIMMRNYVQQQQQEYLRHNAAAGIEPVAAAAALRRCQWMWSVWPHGCIFRWSRR* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2130 274 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Ahy18g2130 274 PANTHER LOB DOMAIN-CONTAINING PROTEIN 32-RELATED 3 235 - -
Ahy18g2130 274 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Ahy18g2130 274 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2130 Ahy-Chr18 114288448 114289272 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2130 1 116 AS2 family AT5G66870 62.931 6.43e-48 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy18g2130 LOB 4.90E-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2130 - - aip:107613313 528.094