Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2099 ATGAGTGTTATGTATAGTCCTGTTCTCAAATACTCACATGGAGTTCTAAGAAAAAGCCATGAAATGATTTCAAATATTAACCATCATCAGCATCAGGATCAAAATCATCATCATCAACAACAACAGCAGCAAAATTCTAGATTATTGAGGTACCGTTCTGCTCCAAGTTCATTCTTGGAAAGCCTTGTTGATATTAACAATGGTGGTGCTAGTGTCAATGAGGACCCTCCTCTGGGACATGGTTGTAACCAACATATTCCATCCACAAGCTCATCATCAGAGGCCATGTTTTCCAAGCCGATACAATCAAACAATGGATGGAGCCGCCGCGATTCGGAACCTGTGCAAGTCCAAGAAGAGTACGGAGGAAGCAACAACAAGCCTACTGTGTTGAAGGAGGAAACTGGGAATTCTTCTTTCTTAAAGGAACAAAATGGTTACTCTTATTGGTCTCAGCAAATTCAAAGTTTGCCAACAAATAATAATGGTTATGATGGCTCTTTTGGTGTAGTGAACTCTGTCAATTCAGATCACTCTACTCAATCTGAAATGGGTATTAGGAATTGCTCCAATCTCATCAGGCAAAAGAGTTCTCCAGCTGGATTTTTCCCCAGTGAAAATGCATTGAGAGAGGTTGAGAGGTTTAGATCCAATGATGTCTCAAACGGACAACCAACTGCTCTTTCTTTCTCATCTAATAGGTCATCCTCTTGCTTGAAAAGGATGCCACAGATTGCCGAATACGAAAACGAAAGTCATGAAGGAACAATTGACCAAAGCAGAAACCTGGTAAATGAGAATGACAGCTCTAAGTACTATGTGCCTAGCTTCACCGGTGAAGTTTGGGACGCCTCTTCATTCAATTCCCAAAAAGCAGCAAGTGCAGATGAAATCATGTTCTCCGCTTCAACTGCTTTGGAATCTCAGGATTCAGACTTCTGCTCACAAAATCTTGGTTTGATTCATCATTTGAGTATGCCTAGTTCTTCTACTCAGATGGGATCTATGGAGAAGTTTCTTCAACTCCAAGGAACCGTTCCATGCAAAATTCGAGCCAAAAGAGGCTTTGCCACTCACCCTAGAAGCATTGCAGAGAGGGTACGAAGAACACGAATTAGCGAAAGAATCAAGAAATTGCAAGGCCTTTTCCCGAAATCGGACAAGCAAACAAGCACAGCAGAGATGCTGGATTTGGCTGTTGAGCACATTAAAGAACTGCAGGAACAAGTTAAGATGCTCACAAATATTAGGTCAAAGTGTAGATGTACAAATACTCAGAAGCAATATTCTTGA 1293 0.4122 MSVMYSPVLKYSHGVLRKSHEMISNINHHQHQDQNHHHQQQQQQNSRLLRYRSAPSSFLESLVDINNGGASVNEDPPLGHGCNQHIPSTSSSSEAMFSKPIQSNNGWSRRDSEPVQVQEEYGGSNNKPTVLKEETGNSSFLKEQNGYSYWSQQIQSLPTNNNGYDGSFGVVNSVNSDHSTQSEMGIRNCSNLIRQKSSPAGFFPSENALREVERFRSNDVSNGQPTALSFSSNRSSSCLKRMPQIAEYENESHEGTIDQSRNLVNENDSSKYYVPSFTGEVWDASSFNSQKAASADEIMFSASTALESQDSDFCSQNLGLIHHLSMPSSSTQMGSMEKFLQLQGTVPCKIRAKRGFATHPRSIAERVRRTRISERIKKLQGLFPKSDKQTSTAEMLDLAVEHIKELQEQVKMLTNIRSKCRCTNTQKQYS* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2099 430 CDD bHLH_AtbHLH_like 361 413 IPR045239 -
Ahy18g2099 430 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 37 426 - -
Ahy18g2099 430 MobiDBLite consensus disorder prediction 29 48 - -
Ahy18g2099 430 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 356 406 IPR011598 GO:0046983
Ahy18g2099 430 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 37 426 - -
Ahy18g2099 430 MobiDBLite consensus disorder prediction 70 110 - -
Ahy18g2099 430 Pfam Helix-loop-helix DNA-binding domain 361 407 IPR011598 GO:0046983
Ahy18g2099 430 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 358 423 IPR036638 GO:0046983
Ahy18g2099 430 SMART finulus 362 412 IPR011598 GO:0046983
Ahy18g2099 430 Coils Coil 396 416 - -
Ahy18g2099 430 Gene3D - 358 428 IPR036638 GO:0046983
Ahy18g2099 430 MobiDBLite consensus disorder prediction 83 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2099 Ahy-Chr18 112002738 112006288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2099 30 424 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 33.094 8.25e-45 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy18g2099 HLH 2.40E-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2099 - - adu:107462676 747.273