Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2088 ATGTCTTCCGAGGCCGGAATGCCTAAGCATGAAACACAAGGGTTTTCCAGCAGCATTCCTCCCAAGCTGGATGTCTACATTTGGGACATGGATGAGACCCTTATACTGCTCAACTCCTTGCTGAAATCATCATATGCCGAGGGTTTCAACGGTCTCAAGGATGTGCAGAAGGGCGTGGAAATTGGGAAGATGTGGGAAAATCTCATTCTACAATTGTGTGATGACTATTTCTTCTATGAACAAATAGAAAATTTAAATTACCATACTCCATTTCTTGATGCTCTGGCCCAGTATGATGATGGGAGGGACCTATCTAATTATGATTTTAACCATGATGAGTTAAGTCCTCCGGATGATGATGCCAACAAAAGAAAACTTGCCTATAGACATCGAGTCATAGCACAAAATTACTTACAGGGTTTGCATAATATTTTAGATCACGAGGCGCAGAAATTTTGGGATGAATTGTATGATAAAACTGATGAATATACTGACAGATGGCTGTCTTCAGCACGGACCTTTTTGAAGGAGTGTTCAGGCCAAAACAAAGATTTGGTTTCTTCCATTGCTTTTTCTAGTGTAGTACCTAACACAACCAATGCAAACCATCAGCATGTAAATGTTTTGGTGACGTCAGGAGGGTTAATACCCTCTCTTGTCAAATGCTTGCTCTTTCGTCTCGACGGTTTAATACCACATGGAAATGTTTATAGCTCTTGTGTAGTGGGAAAAACTCAATGTTTCCGATGGATCAAGGAGCGTTTCAACCATCCGAATGTCCGCTTTTGTGTAATTGGAGATGGATGGGAAGAATGTCAAGCTGCGGAAATCATGAGATGGCCATTTATTAGGATTGACCTGCGGCCAGACAAACTTCATAGGTTCCCTGGTCTCTCATTGACAACAGTTGGCCACTATTTTGCAGTGGTATACGGAAGCCCAGATGATGAGAATGATGCTACCTAG 966 0.4193 MSSEAGMPKHETQGFSSSIPPKLDVYIWDMDETLILLNSLLKSSYAEGFNGLKDVQKGVEIGKMWENLILQLCDDYFFYEQIENLNYHTPFLDALAQYDDGRDLSNYDFNHDELSPPDDDANKRKLAYRHRVIAQNYLQGLHNILDHEAQKFWDELYDKTDEYTDRWLSSARTFLKECSGQNKDLVSSIAFSSVVPNTTNANHQHVNVLVTSGGLIPSLVKCLLFRLDGLIPHGNVYSSCVVGKTQCFRWIKERFNHPNVRFCVIGDGWEECQAAEIMRWPFIRIDLRPDKLHRFPGLSLTTVGHYFAVVYGSPDDENDAT* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2088 321 PANTHER DEVELOPMENTAL PROTEIN EYES ABSENT 12 312 - -
Ahy18g2088 321 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 23 287 - -
Ahy18g2088 321 SUPERFAMILY HAD-like 27 283 IPR036412 -
Ahy18g2088 321 TIGRFAM EYA-cons_domain: EYA conserved domain 24 303 IPR006545 GO:0007275
Ahy18g2088 321 Gene3D - 24 296 IPR038102 -
Ahy18g2088 321 SFLD Haloacid Dehalogenase 23 287 - -
Ahy18g2088 321 PANTHER EYES ABSENT 12 312 IPR028472 GO:0004725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2088 Ahy-Chr18 111670068 111675485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2088 23 315 Protein tyrosine phosphatase (PTP) family AT2G35320 62.034 6.33e-135 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2088 - K17620 gmx:100799315 525.013