Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2074 ATGGTTTTGCAGATTGACGAAGAGCTTCTTCAGGAAGTGGTTAATATGGGATTTGACAGAAATCAATTGGTTGAATCTTTATGCAACAGGATCCAAAATGAGGTGGGGCTGGTGATGATTTGTTTAAAGAGCTATGGAGGCTGTGCAGGGCCATTAATGGATGTTCCTTGTGTTCAAGACAGAGTTTTCTATTTCCCTCATGGTCACATTGAATTGTTGCCAGAACCTACAGAACAAGATTTGAGGCAGATGAAGAACCAGAAATCTCCCAAATACGATCTTCCGTCGAACAAGATATTTAAAGAACAAGATTTTTTTCTCTTCTATCAGAAGGTCAATAACTTTTATTAG 351 0.3846 MVLQIDEELLQEVVNMGFDRNQLVESLCNRIQNEVGLVMICLKSYGGCAGPLMDVPCVQDRVFYFPHGHIELLPEPTEQDLRQMKNQKSPKYDLPSNKIFKEQDFFLFYQKVNNFY* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2074 116 CDD UBA_SnRK1_plant 5 35 - -
Ahy18g2074 116 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 4 27 IPR015940 -
Ahy18g2074 116 Pfam UBA/TS-N domain 5 34 IPR015940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2074 Ahy-Chr18 111159005 111160082 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2074 45 96 B3 DNA Binding Superfamily AT5G62000 51.923 3.27e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2074 K14486 - ahf:114925841 244.202