Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2056 ATGATGGCAGGTAGTGGACAACTAACAGTTCCACCAGGGTTTCGGTTCCATCCAACTGATGAGGAGCTTCTCTACTATTACCTAAAGAAGAAAGTTTCTTATGAAGCCATTGACCTTGATGTCATTAGAGAAGTTGATCTCAACAAACTTGAACCTTGGGACCTCAAAGATAAATGCAGAATAGGATCAGGGCCTCAAAACGAGTGGTATTTCTTCAGTCACAAAGACAAGAAGTACCCAACAGGAACAAGGACCAATAGGGCAACCACTGCTGGTTTTTGGAAAGCCACTGGGAGGGACAAGGCCATATACCATACTAACAATTCCAAGAGGATTGGAATGAGGAAAACCCTAGTTTTCTACATCGGCCGTGCGCCCCACGGCCAGAAGACTGACTGGATCATGCATGAGTACCGCCTCGATGAAGACGACGCCGAAGTTCAGGAGGATGGGTGGGTGGTGTGCAGGGTTTTCAAGAAGAAAAACCAAAGCAGAGGGTTTCAACAAGAAATTGAAGAAGAGGAACATCATCACTTAGCAGCAGAACATCAACACATGAGAGGAGTAGCAAGCCAACAAGTTCTGGACCCAAAACACCACCACCACTTGCAACATCATCAAGGACTCTATGATAATGATAATGATAATAATTACACCAATAATTTTGATGGATCCATGCACCTTCCACAGTTGTTCAGTCCAGAATCTTCCGTGGCTACCGCGGCGGCGCACACTTCCATGAATGCCATGGACATTCTTGAATGCTCCCAGAACCTTCTAAGGCTCACAACAACAAGTGGATGTGGACTCAATCTCATGCAACAACAACATGGAGAGAGGTTCAATGGTGATTGGTCTTTCTTGGATAAGCTTCTTGCTTCACACCATGGCAGCACCATGGATCATCATCACCATCATCATCATCATAGCAAATGCAACAATAATCTTCATCATCAGCATCCTGCAATTGCTATTGGAACTACTTCATCTCAGAAATTCCCATTTCACCACCTTGGTTGTGACAACCATGATATCATGAAGTTTTCCAAGTAG 1053 0.4444 MMAGSGQLTVPPGFRFHPTDEELLYYYLKKKVSYEAIDLDVIREVDLNKLEPWDLKDKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYHTNNSKRIGMRKTLVFYIGRAPHGQKTDWIMHEYRLDEDDAEVQEDGWVVCRVFKKKNQSRGFQQEIEEEEHHHLAAEHQHMRGVASQQVLDPKHHHHLQHHQGLYDNDNDNNYTNNFDGSMHLPQLFSPESSVATAAAHTSMNAMDILECSQNLLRLTTTSGCGLNLMQQQHGERFNGDWSFLDKLLASHHGSTMDHHHHHHHHSKCNNNLHHQHPAIAIGTTSSQKFPFHHLGCDNHDIMKFSK* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2056 350 SUPERFAMILY NAC domain 3 160 IPR036093 GO:0003677|GO:0006355
Ahy18g2056 350 PANTHER PROTEIN SOMBRERO 6 315 - -
Ahy18g2056 350 Gene3D NAC domain 19 165 IPR036093 GO:0003677|GO:0006355
Ahy18g2056 350 ProSiteProfiles NAC domain profile. 10 160 IPR003441 GO:0003677|GO:0006355
Ahy18g2056 350 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 315 - -
Ahy18g2056 350 Pfam No apical meristem (NAM) protein 11 140 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2056 Ahy-Chr18 109673647 109678499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2056 2 350 NAC Transcription Factor Family AT1G79580 56.464 5.27e-123 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy18g2056 NAM 8.30E-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2056 - - adu:107458804 671.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2056 18 109673647 109678499 Ahy18g2056 18 109673647 109678499 ECH