Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2049 ATGGCCACTTCCGCCGCCACCACAACTGCCGCAGCGCCACGCCAGCTGTCACAGAAGGAGCAGGACATCCAGATGATGCTTGCTGCTGAGGAGAAGCTCCAACTTGCTGCTAGGATTATTGTTGCTATCGAGAACCCGCCGGACATCATTATTCAGTCTGCTAGGCCATATGGTCAGAGAGCTGTCCTTAAGTTTACACAATACACTGGTGCGAATGCAATTGCTGGAAGGCACACTCCTGGAACATTCACTAATCAAATGCAAACATCCTATAACGAGCCTCGTCTACTCATTCTGACTGATCCAAGGACTGATCATCAGCCCATTAAGGAAGGTGCTCTTGGAAATATTCCGACCATTGCCTTCTGTGACACCGATTCTCCGATGCGCTATGTTGATGTTGGCATTCCTGCCAATAACAAGGGGAAGCACAGTATTGGTTGTCTGTTTTGGTTATTAGCAAGGATGGTTCTGCAGATGAGGGGTACTATTCGTCCGGGGCTTAAGTGGGACGTGATGGTGGATTTATTCTTCTATAGAGAACCTGAAGAGGCCAAGCAACAAGAGGAGGAGGAATTACCAGCTGCCCCAGAATATGCCATTCAAGATTTTGGTGCTGCTGGCATTGCCGGCTTCCCCGCAGCTGATGGGGAATGGGGGGCTGTTACAGCTGAACAATCCTGGACTGAACCAGTTCCTCAGCAACCCATTGCAGCTGCTCCTGCTAACTGGGCCCCAGACGCCGCTGCAGGTGATTGGGAGCCAGTTCCAGCTCCACAGGCTTCCGTTCCTGCACCTGGAGGTGTTGCTCCCACTGGCTGGGATTAG 828 0.5169 MATSAATTTAAAPRQLSQKEQDIQMMLAAEEKLQLAARIIVAIENPPDIIIQSARPYGQRAVLKFTQYTGANAIAGRHTPGTFTNQMQTSYNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDVGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQQEEEELPAAPEYAIQDFGAAGIAGFPAADGEWGAVTAEQSWTEPVPQQPIAAAPANWAPDAAAGDWEPVPAPQASVPAPGGVAPTGWD* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2049 275 PRINTS Ribosomal protein S2 signature 111 122 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy18g2049 275 PRINTS Ribosomal protein S2 signature 69 86 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy18g2049 275 PRINTS Ribosomal protein S2 signature 94 111 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy18g2049 275 PRINTS Ribosomal protein S2 signature 132 146 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy18g2049 275 MobiDBLite consensus disorder prediction 236 275 - -
Ahy18g2049 275 Pfam Ribosomal protein S2 88 157 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy18g2049 275 ProSitePatterns Ribosomal protein S2 signature 2. 94 118 IPR018130 GO:0003735|GO:0005840|GO:0006412
Ahy18g2049 275 TIGRFAM uS2_euk_arch: ribosomal protein uS2 29 181 IPR005707 GO:0003735|GO:0006412|GO:0015935
Ahy18g2049 275 PANTHER 40S RIBOSOMAL PROTEIN SA 31 267 IPR005707 GO:0003735|GO:0006412|GO:0015935
Ahy18g2049 275 Gene3D - 15 194 - -
Ahy18g2049 275 PANTHER 40S RIBOSOMAL PROTEIN SA 31 267 - -
Ahy18g2049 275 CDD RPS2 31 159 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy18g2049 275 SUPERFAMILY Ribosomal protein S2 31 175 IPR023591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2049 Ahy-Chr18 109413447 109415500 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2049 5 267 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 61.486 5.32e-117 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2049 K02998 - gmx:100786575 365.54