Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2019 ATGTCATCCATTCGTGGTGTGCTTGGATTAGCAGCTTCTCTTGATCTGGAGATTAAGCAAATGGATGTGAAGATAGCTTTTTTTCATGGTGATTTGGATAAAGAGATCTACATGGAGCAACCGGAGGATTTTGTTGTTAAAGAAAAGGAATATTTTGTGTGCAAATTTAAGAAGAGTCTTTATGGGTTGAAGCAAGCTCCAAGACAGTGGTATGAGAGCCGATGGTTACTCGGTCTGGTAATTTTAAGGGGTATTCAAGGGCCAAGCAAGCACCAAGCAGTTACCGTTAGAAGCGGAGCCGACTTATCAGCCTTCTACATGTGCAGCTTCGAGGGCTACCAAGACACACTCTACGCCCATTCCATGCGTCAATTCTACAGCGACGGCCACATTTATGGCACCATTGATTTTATTTTCGGTAACGCCGCCGTAGTCTTCCAAAATTGCAACATCTTCTCCCGCCTCCCTATGACTGGCCAATTCAACTCAATTACCGCACAAGGCAGAACCGATCCCAACCAAAATACCGGAATCTCCATACACAACGCAAAGATTCGACCCGCTGACGATTTGGCCCCTCGCGTTGGTGTTGTGAAAACGTCAACTATCATCTGCAAAGGGAACAACAACAAGAACAAGAGCAACAAAGCAAGAAAGGAAGGCATAATAATAATGGAAGCGAAAGGTGAAGTGAGAAGGCTTCACATAATTTACTTTCTTAGTAACATAGGTGGTCGTGCAGATCATCCTCATCTCATTCGTGTTCTTCATCTTGCTCGTAATGGTGTTTATCTCAGAGATGTTAAGAGGTGGCTTGGGGAATTGAGAGGAAAAGACTTGCCAGAAGCATTTTCTTGGTCCTACAAGAGGAGGTACAAAAGCGGGTATGTGTGGCAGGACTTGTTGGATGACGACCTCATAACTCCCATTTCTGACAATGAATACGTCCTCAAAGGATCACAAATCCATCCAACCCCATTTGAAAATTTTTCCCCTGATGGAAAGATAAAAAATGGTCATGTACTTGCGGAGATAAAATCTCCGCAAGTACATGTTACAGAGGGAAAACAGCAGCCATCTCTAATAGAAGAAGAATCTAGAATTATTGGACGAGACACGGAGTCCAAAATGAATACTCCTTTGAAAGTATCGGAGATCAGTCAGGACTCCTTGGTGTTTAGCTCCGAGAGGTCATCCGTGACGACGGACGGATACGAATCTTGCAAGGCAGAAGAAGAGAAGGAAAAGCCTTTGGTGAGAAGCAACAAAGAATGCAGCATTGAGAAAGAACACGAGAAACCGGAGAATTGTGTATTGCCTTCTTTGTACCACAAACTTCTGAGTAAGAGTATTGGTAACAAAGAAGAACAGAACAAAACTGATACACCTGATTCTTCTTTTTCTACCTCCTCCTCTTCGTCGTCGCAATCCTCCTTTAGCAAGCTTAGGAATAGTTCGAACCGAGTTTCGATGGCATTCCGGAACTGGATTTCTTGTGGGACAGTGGATACAAATGATGCAGCTCTAATAAGGATGGAAGATGCTAAGAAAATTGATTCAAATGAGTCTATGACTAACTTACCAGAAAATAAAGCACAGATTTGTAAAGGAGACAAATTTGGAGGATCAGCCAGGTGTTTTAGAACTTCTTGGAATAATGATCAACAAGAAAACCAACATGGGGCCAGGTGA 1692 0.4297 MSSIRGVLGLAASLDLEIKQMDVKIAFFHGDLDKEIYMEQPEDFVVKEKEYFVCKFKKSLYGLKQAPRQWYESRWLLGLVILRGIQGPSKHQAVTVRSGADLSAFYMCSFEGYQDTLYAHSMRQFYSDGHIYGTIDFIFGNAAVVFQNCNIFSRLPMTGQFNSITAQGRTDPNQNTGISIHNAKIRPADDLAPRVGVVKTSTIICKGNNNKNKSNKARKEGIIIMEAKGEVRRLHIIYFLSNIGGRADHPHLIRVLHLARNGVYLRDVKRWLGELRGKDLPEAFSWSYKRRYKSGYVWQDLLDDDLITPISDNEYVLKGSQIHPTPFENFSPDGKIKNGHVLAEIKSPQVHVTEGKQQPSLIEEESRIIGRDTESKMNTPLKVSEISQDSLVFSSERSSVTTDGYESCKAEEEKEKPLVRSNKECSIEKEHEKPENCVLPSLYHKLLSKSIGNKEEQNKTDTPDSSFSTSSSSSSQSSFSKLRNSSNRVSMAFRNWISCGTVDTNDAALIRMEDAKKIDSNESMTNLPENKAQICKGDKFGGSARCFRTSWNNDQQENQHGAR* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2019 563 ProSitePatterns Pectinesterase signature 2. 131 140 IPR033131 -
Ahy18g2019 563 MobiDBLite consensus disorder prediction 462 484 - -
Ahy18g2019 563 Pfam Protein SOSEKI, plant 235 480 IPR010369 -
Ahy18g2019 563 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 2 72 IPR013103 -
Ahy18g2019 563 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 227 560 IPR010369 -
Ahy18g2019 563 Pfam Pectinesterase 82 199 IPR000070 GO:0030599|GO:0042545
Ahy18g2019 563 Gene3D - 67 214 IPR012334 -
Ahy18g2019 563 SUPERFAMILY Pectin lyase-like 83 199 IPR011050 -
Ahy18g2019 563 PANTHER F3F20.2 PROTEIN 227 560 - -
Ahy18g2019 563 MobiDBLite consensus disorder prediction 393 431 - -
Ahy18g2019 563 MobiDBLite consensus disorder prediction 451 484 - -
Ahy18g2019 563 MobiDBLite consensus disorder prediction 406 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2019 Ahy-Chr18 107318777 107327134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2019 80 200 Carbohydrate Esterase AT4G02330 69.421 2.67e-52 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2019 - - ahf:112770241 1108.2