Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2005 ATGGAGAACCCTCATTCTTCTTCTTTTTCTTCTTCTTCTTGCTATGCTACTTCTTCTCCTTATGTGGTGATTGCATGCGACGCCACTAAGGACCGCAGCGAGAATGAGATTAAGCTAATCCTTGATAACATAAGAAAAAAGGGCGATCTTCTCTCTGCTGGTGACAGGTTGCTTGTGTTCTGTGTATTGCATAGGGTGCTTAACCCCATGGGGTACCAGACCATAGCATGCCCCGAGTCTATGTTTGGTACAAACTTTCGAGCAATGGAGGAACAAGTTAAAAAGAAAGCCGATGCATATGCAATTGAGCTTTTATCAAGTCATGAAGAATTTAAAAGTGTAGGGGTTAGCGTTGAAGTTAAAGTCACTGCAGGTTTTCCTCTTAGACAGGTTATTTTACAGGAGGTTACAAGATACAATGTATCATGGATTATACTTGATAGGCACCTTCGGCGCGACATGAGATTCTACCTGAACAGGATACCATTCAGGGTTGGATTGGTTAAAGATGACTTCTCTGTGGATATCTGGAGATCCCATCATGCAAACATTACAACAATCACCGAAACAAAGCCTGTCTATTCCTTTTACAAGTTTGTCTCTTTAGCAGATTGCCAAAGAGAACATAAGCATACCGATAACTCTCATGTTGGCCAAAAGCAAGGAGGCTCTACACCACCACTTCTTTGTTCTGGATGCAAGATAAGGACCGAATTGTCTGTCAATGAGTTGACGAGGTTTACCTATTCTGAAATACAGCAAGCAACAAATGATTTTTCAAAGGATAACCTAATAGGTGAAGGTGGATATGGTCATGTTTACAAGGGTGTTCTTAAAGATGGACAGCAAATTGCAGCAAAGGTAAGGAAAGAGGAAAGCTCACAAGGCTTTTCGGAGTTTCATTCCGAGGTCTATGTCTTAAGCTTCGCTCGCCACAAGAATATAGTTATGCTATTGGGTTTTTATTGCAAAGAAAACCGAAATATTCTTATATACGAGTATATCTGCAATAGGTCTCTTGGTTGGCATTTATTTGACAAAAGTGCTCCCCTTCTGGAGTGGCAACAAAGGTATGAAATTGCGATTGGAACCGCAAAGGGATTGCGTTTTCTGCATGAGGAATGCCGTGGAGGTCCTATTATTCATCGCGACTTGCGACCATGCAATATACTTCTTACTCATGATTATGTTCCCATGCTAGCTGACTTTGGCCTTGCCAAATGGAGGAACGGTGACGGTACTATGCACACCAGGATAATGGGCACAATAGGATACCTATCTCCAGAGTATGCTGAAACCGGTGTAGTTTCTGAGCGAACAGATGTGTATGCATTTGGCATCGTTTTGTTACAACTGATTTCAGGACACAAGGTCTCCAATTTCCGCAATCCAGAACAACAATCTCTCAGACAATGGGCTATGCCAATCATTGAGTCGTTGGCTTTACACGAACTGATTGACACTCGTCTTGGGAATTCATATGACACGTATCAACTATACCTCATGGCCAAAACCGCATTCTTCTGCGTCCAAATAGAGCCTGATGAGCGTCCTTCAATGGGAGAGGTTGTGCGACTTCTTGAGGGAGAAAGTAAAAACTTCCACACAATAGGAGAGGAATTGTTGCCAAAATATAACAGCTAA 1644 0.4215 MENPHSSSFSSSSCYATSSPYVVIACDATKDRSENEIKLILDNIRKKGDLLSAGDRLLVFCVLHRVLNPMGYQTIACPESMFGTNFRAMEEQVKKKADAYAIELLSSHEEFKSVGVSVEVKVTAGFPLRQVILQEVTRYNVSWIILDRHLRRDMRFYLNRIPFRVGLVKDDFSVDIWRSHHANITTITETKPVYSFYKFVSLADCQREHKHTDNSHVGQKQGGSTPPLLCSGCKIRTELSVNELTRFTYSEIQQATNDFSKDNLIGEGGYGHVYKGVLKDGQQIAAKVRKEESSQGFSEFHSEVYVLSFARHKNIVMLLGFYCKENRNILIYEYICNRSLGWHLFDKSAPLLEWQQRYEIAIGTAKGLRFLHEECRGGPIIHRDLRPCNILLTHDYVPMLADFGLAKWRNGDGTMHTRIMGTIGYLSPEYAETGVVSERTDVYAFGIVLLQLISGHKVSNFRNPEQQSLRQWAMPIIESLALHELIDTRLGNSYDTYQLYLMAKTAFFCVQIEPDERPSMGEVVRLLEGESKNFHTIGEELLPKYNS* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2005 547 CDD USP_Like 50 158 - -
Ahy18g2005 547 Gene3D Transferase(Phosphotransferase) domain 1 336 540 - -
Ahy18g2005 547 PANTHER OS01G0253100 PROTEIN 216 539 IPR045271 GO:0004714|GO:0006468
Ahy18g2005 547 PANTHER RECEPTOR-LIKE KINASE 20 198 - -
Ahy18g2005 547 PANTHER RECEPTOR-LIKE KINASE 216 539 - -
Ahy18g2005 547 Pfam Protein kinase domain 260 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g2005 547 Gene3D Phosphorylase Kinase; domain 1 231 334 - -
Ahy18g2005 547 ProSiteProfiles Protein kinase domain profile. 259 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g2005 547 SMART tyrkin_6 259 527 IPR020635 GO:0004713|GO:0006468
Ahy18g2005 547 ProSitePatterns Protein kinases ATP-binding region signature. 265 287 IPR017441 GO:0005524
Ahy18g2005 547 ProSitePatterns Tyrosine protein kinases specific active-site signature. 380 392 IPR008266 GO:0004672|GO:0006468
Ahy18g2005 547 SUPERFAMILY Protein kinase-like (PK-like) 240 528 IPR011009 -
Ahy18g2005 547 PANTHER OS01G0253100 PROTEIN 20 198 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2005 Ahy-Chr18 106316114 106323584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2005 207 530 Trihelix Transcription Factor Family AT1G70460 42.424 7.73e-78 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Ahy18g2005 Pkinase 1.50E-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2005 - - var:108330428 761.14