Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1977 ATGAGCAAGAAACAAAGGAGGCTAGCGAGCAAGCATGAGAACTTCCTCCGAAAATCAAGAGATCGAGTGGCTGTGTTCATAACGTTCGTTGACAACCTTCAAAAGGATGAATACCCTGCCATTGATGCTGATGAGAAAGTTGATTCAGAGGAAAACGTGTTGAAAGAATTTCAGAAGGCACAGCGTCCTGCAGCAGAGAAGGAAACTTCTTACACCCCATTTGTTCCACAAGCTGCTCCATCCAGCTATACAGCTAATGAAGCAGATGCTAATTCTGGTAAGACACCAGAACAACGTGCCCTTGTTGTGGAATCCAGAAGGCAGGAGGTCTTGTTTTTAGATAATGAGATTGCTTTCAACGAGGCTATCATTGAAGAAAGAGAGCATGGCATTCAAGCAATTCAGCAGCAAATTGGTAAAGTAAATGAAATTTTTAAAGACCTTGCTGTGCTTGAATTAAAAACCGAAAAAATCGACCGAACCAAACCGCTATTAGTTCAGTTCGATTCGGTTGTTGTAAAAGCAGCAAACCGAACAGTTGTGTTTGTAGGAACTGAACATATCGGTTCGGTTGGTTTTTGA 582 0.4192 MSKKQRRLASKHENFLRKSRDRVAVFITFVDNLQKDEYPAIDADEKVDSEENVLKEFQKAQRPAAEKETSYTPFVPQAAPSSYTANEADANSGKTPEQRALVVESRRQEVLFLDNEIAFNEAIIEEREHGIQAIQQQIGKVNEIFKDLAVLELKTEKIDRTKPLLVQFDSVVVKAANRTVVFVGTEHIGSVGF* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1977 193 PANTHER SYNTAXIN OF PLANTS PROTEIN 51 151 - -
Ahy18g1977 193 SUPERFAMILY t-snare proteins 52 151 IPR010989 GO:0016020|GO:0016192
Ahy18g1977 193 PANTHER SYNTAXIN 51 151 IPR045242 -
Ahy18g1977 193 Gene3D - 47 160 - -
Ahy18g1977 193 MobiDBLite consensus disorder prediction 58 96 - -
Ahy18g1977 193 MobiDBLite consensus disorder prediction 74 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1977 Ahy-Chr18 103775064 103779842 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1977 53 176 SNARE and Associated Proteins AT5G46860 61.940 1.04e-44 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1977 - K08488 aip:110265335 364.385