Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1965 ATGGTTAAACCATCATCTTTCTCATATCATATGGAAAACCATCAAAACAATAACCCGACCCGTGACCCAGACCTAGCAGAAGAAGAGAAGAAGAAGCGACACCAACACCCTCAGGTTTGGGGCACGTGGGAGGAACTCTTGCTAGCGAGCGCCGTCAACCGCCATGGCTTCAAAGACTGGGACACCGTCGCCATGGAGGTACAGTCGCGGACCTCCGTACCCAACCTACAAGCCACCGCGCTCCACTGCGAGCAGAAATTCCACGATCTCAACCTCCGATTCGCCGACCAATTAAACGACGCCGTGCCGCCGCTTCTCCAGAACGGCGCGGCCGCCGTCGATAGCTCTGATCATGTCCCCTGGCTCGACGAATTGCGAAAGCTCCGCGTCGCCGAGCTCCGCCGCGAGGTCCAACGCTCCGACGTTTCTATCCTGTCGTTGCAGTTGAAGGTGAAGAAGTTGGAGGAGGAGAGAGAGAAAGAAAATGACGGTAAAGTCGATGAGAAAGCAGATCTGGCGGTTTGCGGCGAGGCACGGCCCGGAAACGATGGAACCGGCGGAGAAAGGGAAGTTCCGGAGCCGACCGGTTCTGAACCGGAGATTCGCCGGCTCGACGAGAGCACCACGAACACTGATAAGCTTTTGCCAACCACCGGTGACGAGTCGGACCGGGAAAATCAGTCGGTTAATGAGTCGAACTCGACCGGTTCGCGGTTTGAGGGAGGGAAAACCGGAGCAGGAGATGGTGATGGGAAGACGGGGGTAGGGGCGGTTCCGGTTCATCCCGGTCCGAAAGAACCGGATCCGGTTGGCAGGAAGCGGAGACCGATTGGGGAGGAATCGAATAACGGAAGCTACGATACTGAGGTTAAAGTTCCAACGTGCGAGTCGCAGCCGCCAAGTGAGGAGAGGAAGGCAGAGGATGGTGACTCGTCCGAGTTGCGTGATGACTCGGTGGGCCACTCGGGGGAAGGGGGACGAGGGACGAGGGAGAGCAGCGAGGTGCAGAGCTCTGCTAGCCTGACGAGGAAGAGGAAGACGCGGCGGAGGAAGGAGGCTTCCGGTGGTAGTGGTGGCGGCGAGGTGGCCCTGGAGAGTGACGAGACCATGGTGAAATCCGAGCCGTTGATTGGGCTGTTGGAGATGATCAAGGCACACGAACACAGCTCATTGTTCGAGCGCCGTCTCGAGAGCCAGCAGGAATCGGAAAGATACAAAAACATTGTAAGACAGCACGTGGATTTGGAAACCATACAATCGAGACTCCATAAAGGACACTATTCCTCTAGCACCAACTCTTTCTTTCGTGACCTTCTCCTCCTCTTTACGAATGCCACCGTCTTCTTTACCAGAGACTCCCTGGAATCAACGGCGGCGCAGCAGCTGCGGCGCCTCGTCATGGCAGAGATGAAAAACCAAGGCCAAGCACAATCTGATCCCACCCCACAGAAGACGGATTCCAACCCTCCAAACGCTCCTCAAGCCAAACCAGAATCTCTCCTTTCCAAGCACAAAGCCTCTGCTCCAATATTGGTATGCCGAAAACGCAGTTCAATGTCATCTAAACCTTCCCCGGCGACCTTTGGCCAAAAGGGTGACCAACCCGTCACCGATAAGAAGGAAAAACCATCTTCTGATGCAAAACCACCCATGAAACCCTCTTCTTCCGAGACAGATGAAGATGAGCCTCCCAAGGCCAAGGAAAAGCCGGTCACCGGAGCTCGAAGCCTGAGAAGAAGCAACAAGAACCTCAGCAGCAACAGCAATTCTGGCAATAAGAAACTCCCCACTAACTCCACCATAAAAGCAGCGACTTTGGTGACCAAGGCTGTCGAAGCCGCAAAACCAGACAAGAGCAAAGCAGAGGGAGGACAGGACAAGAAGAAGAATGCCGCTGCTGATTTCTTGAAACGAATAAAGCGAAACGCTCCAGTGGAGGCACTGAAGAGTGGCAGTGGTAGTGGTGGAGGAAGTAGTAGCAGCAGCAGAGGTGGGACTGCAAGTATGAAAGAGCAAAAGAAAATTGTGAATAGTGGAAAGGGTGATAATAAAGGGAAAGAAAGGGCGTCAAGGCATAATAACGGTGGAGGAGGAGGGTCAGGGGATAAAAGGAACAAGAACGTTGTTGAGAATAGCAAGAGGAGTGTAGGTAGGCCTCCAAAGAAAACAGCAGAAAGCAATACAGCTTCTGCAAAGCGTGGGAGGGAAAATAGTGCTAGTGCTAGTAAGGATAAGCGACCCAAGAAACGTTCTAAGAAATGA 2262 0.5376 MVKPSSFSYHMENHQNNNPTRDPDLAEEEKKKRHQHPQVWGTWEELLLASAVNRHGFKDWDTVAMEVQSRTSVPNLQATALHCEQKFHDLNLRFADQLNDAVPPLLQNGAAAVDSSDHVPWLDELRKLRVAELRREVQRSDVSILSLQLKVKKLEEEREKENDGKVDEKADLAVCGEARPGNDGTGGEREVPEPTGSEPEIRRLDESTTNTDKLLPTTGDESDRENQSVNESNSTGSRFEGGKTGAGDGDGKTGVGAVPVHPGPKEPDPVGRKRRPIGEESNNGSYDTEVKVPTCESQPPSEERKAEDGDSSELRDDSVGHSGEGGRGTRESSEVQSSASLTRKRKTRRRKEASGGSGGGEVALESDETMVKSEPLIGLLEMIKAHEHSSLFERRLESQQESERYKNIVRQHVDLETIQSRLHKGHYSSSTNSFFRDLLLLFTNATVFFTRDSLESTAAQQLRRLVMAEMKNQGQAQSDPTPQKTDSNPPNAPQAKPESLLSKHKASAPILVCRKRSSMSSKPSPATFGQKGDQPVTDKKEKPSSDAKPPMKPSSSETDEDEPPKAKEKPVTGARSLRRSNKNLSSNSNSGNKKLPTNSTIKAATLVTKAVEAAKPDKSKAEGGQDKKKNAAADFLKRIKRNAPVEALKSGSGSGGGSSSSSRGGTASMKEQKKIVNSGKGDNKGKERASRHNNGGGGGSGDKRNKNVVENSKRSVGRPPKKTAESNTASAKRGRENSASASKDKRPKKRSKK* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1965 753 MobiDBLite consensus disorder prediction 193 209 - -
Ahy18g1965 753 MobiDBLite consensus disorder prediction 613 753 - -
Ahy18g1965 753 MobiDBLite consensus disorder prediction 675 691 - -
Ahy18g1965 753 MobiDBLite consensus disorder prediction 266 280 - -
Ahy18g1965 753 MobiDBLite consensus disorder prediction 721 736 - -
Ahy18g1965 753 MobiDBLite consensus disorder prediction 471 495 - -
Ahy18g1965 753 Gene3D - 363 480 IPR036427 GO:0005515
Ahy18g1965 753 MobiDBLite consensus disorder prediction 534 575 - -
Ahy18g1965 753 MobiDBLite consensus disorder prediction 21 36 - -
Ahy18g1965 753 ProSiteProfiles Bromodomain profile. 384 456 IPR001487 GO:0005515
Ahy18g1965 753 SUPERFAMILY Bromodomain 374 473 IPR036427 GO:0005515
Ahy18g1965 753 MobiDBLite consensus disorder prediction 298 328 - -
Ahy18g1965 753 MobiDBLite consensus disorder prediction 613 644 - -
Ahy18g1965 753 MobiDBLite consensus disorder prediction 517 531 - -
Ahy18g1965 753 MobiDBLite consensus disorder prediction 1 36 - -
Ahy18g1965 753 Pfam Bromodomain 379 459 IPR001487 GO:0005515
Ahy18g1965 753 SMART bromo_6 369 475 IPR001487 GO:0005515
Ahy18g1965 753 CDD Bromodomain 379 470 - -
Ahy18g1965 753 MobiDBLite consensus disorder prediction 576 601 - -
Ahy18g1965 753 Coils Coil 144 171 - -
Ahy18g1965 753 MobiDBLite consensus disorder prediction 155 367 - -
Ahy18g1965 753 Pfam Myb-like DNA-binding domain 38 72 IPR001005 -
Ahy18g1965 753 MobiDBLite consensus disorder prediction 1 20 - -
Ahy18g1965 753 MobiDBLite consensus disorder prediction 471 601 - -
Ahy18g1965 753 CDD SANT 40 73 IPR001005 -
Ahy18g1965 753 SUPERFAMILY Homeodomain-like 33 73 IPR009057 -
Ahy18g1965 753 MobiDBLite consensus disorder prediction 652 673 - -
Ahy18g1965 753 MobiDBLite consensus disorder prediction 155 174 - -
Ahy18g1965 753 PANTHER BNAC04G22430D PROTEIN 23 753 - -
Ahy18g1965 753 MobiDBLite consensus disorder prediction 706 720 - -
Ahy18g1965 753 MobiDBLite consensus disorder prediction 281 295 - -
Ahy18g1965 753 PANTHER BROMODOMAIN-CONTAINING PROTEIN 8 23 753 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1965 Ahy-Chr18 102333781 102339102 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy18g1965 Bromodomain 1.40E-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1965 - - adu:107458545 1296.18