Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1962 ATGGGTCAAGAATTTTCTCATGAAGGGGTTAATAGCGAGCATACATCATATGATCAATATGAGCAGGAGGAAGAAAAATATGAGGAAGTTGACGTGGATTATATGGATGAGGACGACACAAATGTGGAACCAATGTTCGATTATCACAGCTTCGATGAAGGATATGCAAGGACAAGAGGCTTTAGTGCTCGGAAGAACAGGACTAGGAAGAGTCGTGCGGGCGCACTTAAGTTGAAGAATTTTGTATGTCATCGTGAAGGATTTAGACCACAAAATAATTACGGCATTGGAAACCTTAAGAGAAAACCTACACCCGAGACAAGGTGTGGCTACAGTGCAATGATGGAGATTCGTGTAGATGACCTAGTAGTCATTGCTTTGAAGTATCTAGAATATCAAGCAACAAATGACCCTTCTCTCTATTTTAATCATCACATGAATGCCGATGGTACTTTGCGCAATTTATTCTGGTGCGATGGTCTCAGTAGGGCAGACTACTCATTATTTGACAATGTGCTGGCTTTTGATGCTACCTATAAGAGGAATAAATATATATGTCCACTGGTAGTATTTTCTGGTGTCAATCATCACAATCAAACAATTATCTTTGCTGCTGCTTTAATTTGTGATGAGGAAAAAGACACATATAGGTGGTTGCTACAACAACAGAAGGTGGCAATGAATGGGAAAGCACCTGTTTCGGTGATTACGGATGGTGATCTATCAATGAAGATCGCCATTGAAAAAAAGTTTCCTAATGCACATCATAGATTATGTGCATGGCATCTGATTCGCAATGCAACAAGTAACATTGGCAAGCCCCAGTTTACCTCCATGTTTAAAAAGTGTATGCTAGGCGACTATGAAATTGATGTATTTCGTCAAAAGTGGTTTGAAATGATTGAGGGATTTGGTGTCGAAAACAAGAATTGGGTCCTAGATATGTATAAAAAAAGACATTCATGGGCAACTGCACATATAAGAGGGAAGTTTTTTGCTGGTTTTCGGACTACTTCTCAGTGCGAGGGATTAAACTCGATCATTGCAAAGTATGTCAACTCAAGATATAAAGGAGTTACCAAGGTCATTAGTCTTGCCTCGGTGGACCAAGACTGCCAAAGTAGGTTTACAAAATGTGGCCGGGCTTCATTGGAATTCTTTGATGCTAAGTCAATACGGTTGTTTGATGGATTGGTTTAG 1200 0.3983 MGQEFSHEGVNSEHTSYDQYEQEEEKYEEVDVDYMDEDDTNVEPMFDYHSFDEGYARTRGFSARKNRTRKSRAGALKLKNFVCHREGFRPQNNYGIGNLKRKPTPETRCGYSAMMEIRVDDLVVIALKYLEYQATNDPSLYFNHHMNADGTLRNLFWCDGLSRADYSLFDNVLAFDATYKRNKYICPLVVFSGVNHHNQTIIFAAALICDEEKDTYRWLLQQQKVAMNGKAPVSVITDGDLSMKIAIEKKFPNAHHRLCAWHLIRNATSNIGKPQFTSMFKKCMLGDYEIDVFRQKWFEMIEGFGVENKNWVLDMYKKRHSWATAHIRGKFFAGFRTTSQCEGLNSIIAKYVNSRYKGVTKVISLASVDQDCQSRFTKCGRASLEFFDAKSIRLFDGLV* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1962 399 MobiDBLite consensus disorder prediction 1 16 - -
Ahy18g1962 399 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 127 357 IPR031052 GO:0006355
Ahy18g1962 399 Pfam FAR1 DNA-binding domain 51 120 IPR004330 -
Ahy18g1962 399 PANTHER OS02G0262500 PROTEIN 127 357 - -
Ahy18g1962 399 MobiDBLite consensus disorder prediction 1 29 - -
Ahy18g1962 399 Pfam MULE transposase domain 172 266 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1962 Ahy-Chr18 102259901 102261839 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy18g1962 MULE 3.30E-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1962 - - aip:107611260 804.283