Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1935 ATGGAAAGAATGTTCCCTCCAAAGAAGCCCTCAACTATGAATTCCCATGACAGACCCATGTGTGTTCAAGGCGACTCGGGTCTCGTTCTCACCACTGACCCCAAACCTCGCCTCCGTTGGACCGTTGAACTCCATGAACGTTTCGTTGATGCTGTTACTCAGCTTGGTGGCCCTGACAAGGCGACTCCTAAAACCATCATGAGGGTTATGGGTGTGAAGGGTCTCACACTTTACCACCTCAAGAGCCACCTTCAGAAATTTAGGCTCGGTAAGCAGCCCCACAAGGAATTCAACGATCACTCGATTAAGGATGCTTCGGCAATAGAACTGCAACGAAACACTGCCTCGTCTTCTGCCATGATTGGCCGCAACATGAACGAGATGCAAATAGAGGTGCAGCGAAGACTCCATGAACAACTTGAGGTGCAAAAACATCTTCAGCTAAGGATTGAGGCACAAGGAAAATACATGCAAAGCATATTGGAAAAGGCGTATCAAACCCTGGCAACTGAGAACATGGGGGCGGTGGCGGCAGCGGCAACGAACATGAAGGGGATTGGAGGAGGAGCCCATGGAATCCCTGACATGGGTGTCATGAAGGACTATGGTTCCCCTCTAAACTTCACATCTTTCCAAGACCTTGACATCTACGGCGGCGGAGGCGGAAATGACCAAATTGACCTTCACCAGAACCTGGAGAAGCCAACCCTTGACGGTAGTGGATTCCTTCCAATCAATGAGGGTCTTTGCCTTGGTGGGAGCAATAACAGTAGTAATAACAAGAAGAGGCCAAACCCTTATGGTAGTGGCAACAACACTGGGAAAAGCCCTTTGATTTGGAGTGACGATCTTAGGCTTCAAGATTTGGGAACAGCTTCTTCATGCCTTGGTGATGATTCTTTGTTCAAAGGTGAACAAATCCAGATGGATCATAGAGGAACTCATGAGATTGATCCAATGGCTGAGATCTATGACACAAAGCCTGTTCTTCAAGGTGCTGACGGAGATAACAAGAAATTTGATGCTTCTATGAAGCTTGAAAGGCCTTCACCGAGAAGGATGAGTCCTATGATCAGCACTGGAACCATGGCACAAGGTAGAAGCTCACCATTTGGATGA 1119 0.4799 MERMFPPKKPSTMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDASAIELQRNTASSSAMIGRNMNEMQIEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLATENMGAVAAAATNMKGIGGGAHGIPDMGVMKDYGSPLNFTSFQDLDIYGGGGGNDQIDLHQNLEKPTLDGSGFLPINEGLCLGGSNNSSNNKKRPNPYGSGNNTGKSPLIWSDDLRLQDLGTASSCLGDDSLFKGEQIQMDHRGTHEIDPMAEIYDTKPVLQGADGDNKKFDASMKLERPSPRRMSPMISTGTMAQGRSSPFG* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1935 372 PANTHER MYB FAMILY TRANSCRIPTION FACTOR APL 4 329 - -
Ahy18g1935 372 MobiDBLite consensus disorder prediction 355 372 - -
Ahy18g1935 372 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 329 IPR044848 GO:0003700
Ahy18g1935 372 MobiDBLite consensus disorder prediction 1 20 - -
Ahy18g1935 372 Gene3D - 34 92 - -
Ahy18g1935 372 MobiDBLite consensus disorder prediction 253 277 - -
Ahy18g1935 372 MobiDBLite consensus disorder prediction 347 372 - -
Ahy18g1935 372 Pfam MYB-CC type transfactor, LHEQLE motif 128 167 IPR025756 -
Ahy18g1935 372 SUPERFAMILY Homeodomain-like 34 90 IPR009057 -
Ahy18g1935 372 Pfam Myb-like DNA-binding domain 38 86 IPR001005 -
Ahy18g1935 372 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 35 90 IPR006447 GO:0003677
Ahy18g1935 372 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 92 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1935 Ahy-Chr18 98785985 98789040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1935 4 372 G2-like Transcription Factor Family AT1G79430 57.403 6.25e-124 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ahy18g1935 Myb_DNA-binding 2.00E-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1935 - - ccaj:109805894 531.176