Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1924 ATGGCGTCGCAGTCGTCATCACCACCTTCAGGAATAGCAGAGAGTGATGGTGGAAGTAGAGGCAGAACTGAACCGCTTCTAGTGTCGCAAGAAGATGAAGGGAGCGGTTCATGGAGACTCAATGTCAAGGAGTTTAGTCTTAAAAACAACCACGAACACAACCGGAATGGCGGAAGCAACAATCTCAATCACCGTACTTTCACATTTTTACGCAGACCTAGGAAGCAGCGCAAGGTGGCAGAATATTACAAGAAACAGGAGAGACTCCTTGAAGGATTTAATGAGATGGACACTATGGCTGAAACCGGGTTTTTCCCAGGAAGTCTCACTGAGGATGAAATGAAGCAACTAGCCAAGAGTGAGAGGATGGCGGTTTATGTGTCGAATGCGTGTAACTTGCTGCTCTTTGCAGCTAAGGTTTTTGCCTCAGTCGAGAGCAAATCCTTAGCTGTCATTGCCTCAACCATGGATTCTCTCTTGGATCTCTTGTCAGGGTTCATATTGTGGTTTACTGCGAATGCCATGAAAACTCCAAACCGTTTTCACTATCCAATCGGAAAGAAGCGCATGCAACCAGTGGGTATCATTGTGTTTGCATCAGTGATGGCAACACTGGGGCTGCAAATTTTGATTGAGTCTGGCAGAGAACTTATTACCAAGACTAAGCCTGAAATGGACCCAGTGAAGCTTAACTGGATGATCGGAATTATGGTATCTGTCACCGTTGTGAAGTTCATTCTTATGGTCTATTGTCGAAAGTTCAAGAACGAAATTGTCAGAGCATATGCACAAGATCACTTCTTCGATGTCATTACCAATTCGGTTGGATTAGCTGCTGCTGTGCTTGCTGTCAAGTTCTATTGGTGGCTTGATTCAACAGGAGCTATTGTTATTGCATTATACACAATCAACACATGGACAAGGACAGTGATTGAGAATGTCTGGTCGCTCATCGGAAGGACAGCACCGCCCGATTTCCTGGCGAAGTTAACTTACCTTATATGGAATCACCATGAACAGATTAAGCACATAGATACAGTCAGAGCATACACCTTCGGTGCACATTACTTTGTCGAAGTTGATATTGTGTTGCCGGAAGACATGCTTCTGAATCAAGCACACAATATTGGTGAGACTCTCCAAGAGAAGCTGGAGCAACTTCCAGAAGTTGAGAGGGCTTTTGTCCACATAGATTTTGAGTTCACTCATAGGCCTGAACATAAGATCATGGTATGA 1236 0.4442 MASQSSSPPSGIAESDGGSRGRTEPLLVSQEDEGSGSWRLNVKEFSLKNNHEHNRNGGSNNLNHRTFTFLRRPRKQRKVAEYYKKQERLLEGFNEMDTMAETGFFPGSLTEDEMKQLAKSERMAVYVSNACNLLLFAAKVFASVESKSLAVIASTMDSLLDLLSGFILWFTANAMKTPNRFHYPIGKKRMQPVGIIVFASVMATLGLQILIESGRELITKTKPEMDPVKLNWMIGIMVSVTVVKFILMVYCRKFKNEIVRAYAQDHFFDVITNSVGLAAAVLAVKFYWWLDSTGAIVIALYTINTWTRTVIENVWSLIGRTAPPDFLAKLTYLIWNHHEQIKHIDTVRAYTFGAHYFVEVDIVLPEDMLLNQAHNIGETLQEKLEQLPEVERAFVHIDFEFTHRPEHKIMV* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1924 411 SUPERFAMILY Cation efflux protein transmembrane domain-like 120 319 IPR027469 -
Ahy18g1924 411 MobiDBLite consensus disorder prediction 1 35 - -
Ahy18g1924 411 Gene3D Cation efflux protein, cytoplasmic domain 322 399 IPR036837 -
Ahy18g1924 411 PANTHER METAL TOLERANCE PROTEIN 9 30 411 - -
Ahy18g1924 411 Pfam Cation efflux family 127 317 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Ahy18g1924 411 PANTHER MITOCHONDRIAL METAL TRANSPORTER 1-RELATED 30 411 - -
Ahy18g1924 411 Gene3D Cation efflux protein transmembrane domain 122 317 IPR027469 -
Ahy18g1924 411 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 322 398 IPR036837 -
Ahy18g1924 411 Pfam Dimerisation domain of Zinc Transporter 324 398 IPR027470 -
Ahy18g1924 411 TIGRFAM CDF: cation diffusion facilitator family transporter 124 398 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1924 Ahy-Chr18 96877510 96882313 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1924 - - gmx:100803531 667.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1924 18 96877510 96882313 Ahy18g1924 18 96877510 96882313 ECH