Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1905 ATGGATAAATCTGAGCAGACTCAGCAGCAGCAGCAGCAACAACAACAACAACAACAGCATGTGATAGGTGTTGCAGCAAGTGCTAGCCAAATGGCTTATTCTTCTCACTACCCGACTGCTCCTATGATGGCATCTGGTACACCTGCTGTAGTTGTGCCTTCACCAACGCAGTCTCCAACCGCTTTTTCCAATTCCCCTCACCAACTTGCATACCAGCAAGCGCAACACTTCCATCACCAGCAACAGCAGCAACAGCAGCAGCAGCTTCAACTATTCTGGGCAAACCAAATGCAAGAAATTGAGCAAACAATTGACTTTAAGAACCACAGCCTCCCCCTTGCTCGCATTAAAAAGATCATGAAAGCCGATGAAGATGTCCGGATGATTTCAGCAGAAGCCCCAGTAATATTTGCAAAAGCATGTGAAATGTTCATTCTGGAGTTGACTTTGCGATCTTGGATCCACACCGAAGAGAACAAGAGGAGAACTCTGCAAAAGAATGATATAGCAGCTGCTATTTCGAGAAATGATGTTTTTGATTTCTTGGTTGATATCATTCCAAGAGATGAGTTGAAAGAGGAGGGACTCGGAATAGCAAAGGCTACTATTCCAATAGTGGGTTCTCCGGCTGATATGCCATATTATTATGTCTCTCCGCAGCACCCTGTAGGGCCTCCAGGGATGATAATGGGAAAGCCAGTTGATCAAGCAGCACTGTATTCTACACAGCAGCCTCGAGCTCCAATGGCGTTCATGCCATGGCCGCAGGCGCCCTCGCAACAGCAGCCACCCCAACAGGAACAAACAGACTCTTGA 816 0.4706 MDKSEQTQQQQQQQQQQQQHVIGVAASASQMAYSSHYPTAPMMASGTPAVVVPSPTQSPTAFSNSPHQLAYQQAQHFHHQQQQQQQQQLQLFWANQMQEIEQTIDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRNDVFDFLVDIIPRDELKEEGLGIAKATIPIVGSPADMPYYYVSPQHPVGPPGMIMGKPVDQAALYSTQQPRAPMAFMPWPQAPSQQQPPQQEQTDS* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1905 271 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 13 265 - -
Ahy18g1905 271 SUPERFAMILY Histone-fold 67 182 IPR009072 GO:0046982
Ahy18g1905 271 MobiDBLite consensus disorder prediction 1 21 - -
Ahy18g1905 271 MobiDBLite consensus disorder prediction 249 271 - -
Ahy18g1905 271 Pfam Core histone H2A/H2B/H3/H4 64 173 IPR007125 GO:0003677
Ahy18g1905 271 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 13 265 - -
Ahy18g1905 271 Gene3D Histone, subunit A 71 188 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1905 Ahy-Chr18 94597477 94600501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1905 89 217 CCAAT-HAP5 Transcription Factor Family AT1G56170 88.462 1.08e-81 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Ahy18g1905 CBFD_NFYB_HMF 2.30E-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1905 K08066 - gmx:100796987 386.341