Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1899 ATGGAACCGTCAGGATTCCAGAGAACTCTTATGAGCAATAGCATGGAACCTAGAAATGAATTCCACCATGGATCACACTCAGTAACACATGACCGTATGGATGGCAGTAATACTAACAGAAGACCACCTGACCTCAATAAATCAGAAGTTAAACCTGTACTTAATTACTCCATTCAGACGGGTGAGGAATTTGCACTTGAATTTATGAGAGATAGGGTGAATCTTGGGAAACCTGTATTTTCAAATGTTGGTGATTCCAATTATACAACGGGATATATGGAGCTGCAAGGCATGTTAGGCATTGGTCATGCTGGATCTGGAAGTGGATCAGACATCTCTATGCTCTCAGTGGTTGACAAATATCCAAAAGAGTTTGATAAAATAAACACATCAATATATGGGGACAGAAGTAATTATGGGTCCATTCGATCAATACCAACTACTTCATTGAATCAAGACAATAGACAATTTGTGCATAGATATGGCTCTTCTCGAGGTTATGATAGCTCATTGTTGATGATGAAGTTTCTTTGCAGCTTTGGTGGTAGAATATTACCACGACCTAGTGATGGAAAGCTAAGGTATGTTGGAGGTGATACACGTATTCTTCGCATAAGAAAGGACATTACTTGGCAGGAGCTTATGCATAAAGCATTGTTAATCTATAGTCAGGTTCAAGTAATCAAGTATCAGCTTCCTGGGGAAGATCTTGATGCTCTGGTATCGGTATCATCTGACGAGGATTTGCAGAATATGATGGAGGAATGCACTCATCTACAAGATAGAGAAGGAACGCAGAAGCTTAGGATGTTTTTGTTCTCAATCAGTGATTTGGAGGATGCTCAGTTTGGTCTTGGTAGCATGGGGGATGATTCTGAGGTCCAGTATGTTGTTGCTGTTAATGGAATGGACTTGGGATCAAGGAGAAACTCAACCCTGATTGGTGTCGGCTTTTCAGCAGATGTTGTGCATGAATTGGATGGACAAACTATTGAGAGGGAGACCAATAGAGTTGCTGTAGAATCTGAAGGTGTTAGCAATGTTCCCTTGACTAACAAATTTGACTTGCCTTTGAATAGTCAGTCTTCGCAACCAGTGCTATCCACAGCCCCAAATTCCTATGAAACCTATCCTCTGTTTCACAGTGACCAAATGATGCACCATGAGGAGGTGAGAGGTCAATATGGCCTTAATCCTGCTTATATGCCTGTTGTTGGAGAGACTCCTATTACAATGCCCACTACCCAGGTGGTTATTAATCCACAAGGGGTTTTGAATGACATCTATCCACCTAGTGGATTACAAGTCCAAAGTCCAGAAATACCTACAACTCTGATGGCAAATACTTCAATTCAACAAGGAAGCGACCCTGGGAAAGCTTTCTCATTAGAAACACCACTTCCAGCTCCTGTGCAACTGTTTGATGGTTACCCAAAAAATAATCTTCCTGAAGCATCAGTTGCAGTTAATGTGCCAGACGGGTATTCATTGCCTCCAACTAAAAAGGACCAGCTTCAGGATGATGAAGTGGCTTCGTCTACTTCTAGGAGCACCTTTGGTCCAACTTACGTTGATTCTCACTCCAATGCAGTTGACTTGAGTTGTCTTCACCCTCCTCCTCTTCCCAAAAGAGTTTACTATTCAGAAAGAATTCCAAGGGAGCAAATAGAGTTGCTGAATCGGTCTTCAAAGTCAGATGATGCACATGGTTCTCAGTTTAATGTGTCAGAATTACTTTCTGAAGTTAACCCGACAGAATTACTGACAGAATCTGGTGAAAACTTGCATGATGGAAATCTGTCTAATCTAACTGAGTATTCGAAGGTCGTAGCAAAGCCCTTGCAATCAGACGGCATTACAATTGATAATGGGGCTGTTAAACATCAAAAGCAATTGCCTGATGCAAGCGGTCAGCTGAAGTCAAAGTTGAGTGAGCATGTAAAGCCCGAGTTGAAGCAGGTGTTGGCAAATAGTGAAGGAATCATAGATGCAGTAAATAAGGATAACGTTCCTCAGTTGGAAAGTGAAATTAATAGTAAGGATAACCATAACAAAGCCCTGCTTGGTGAGAAGAAGGGTAGTAAGTCAGACTTAACTACTTTGCAACAGGTTCCTTCTGTTAAGCAGCTTGAGGATCCAGCATCAAATCTTCCAGATATCGATTGGGGTGGTGTTTCTGTGAAGGACTCTAAGGATGATTCTGTTGTGCAAGGATTGCCTGTTTCTGTAAATGGGAATGCTACGACCAATGGTGATTCACAGCATTATCCTTCAAATGTTTCCAAAGAAGGACAAGGTGAGATGGGAAAGGTGGAAGAAGATAATAGAACTCAACATGTTACGCCTCTAACAGCTGAAGAAAAATATCAGAATGACTTAGATGGAAGAATTGGAACAGAAACGGCTGTTCCTGAGTCAAACTATGATCATTCCCAATTGAATGACGCTGAAAGTATGCAGTTTGATGCTATGATGGAAAATGCAAGGGCACAAGAGTCAGAATTTGAGGATGCATTGGTTGAAGCAAGAAAGAGTGTTCTGCCTCCGCTTGATCCTTCTTTAGGGGATATTGATATGAGTGGCGTGCAGGTAATAATGAATGAAGATCTTGAAGAGCTTAAGGAACTGGGTTCTGGTACCTTCGGGACTGTGTATCATGGAAAATGGCGAGGAACTGATGTCGCAATTAAAAGAATAAAGAAAAGCTGTTTCACTGGTCGTTCATCTGAGCAAGAGAGACTGACTGTAGAATTCTGGCGGGAAGCTGACATTCTTTCCAAGCTTCATCATCCAAATGTGGTAGCATTTTATGGTGTAGTCCAGGATGGACCAGGTGGAACGATGGCCACTGTTACAGAGTTCATGGTGGATGGTTCCCTTAGGCATGTATTACTTCGTAAGGATAGGTATCTTGATCGTCGCAAGAGACTGATTATTGCAATGGATGCAGCTTTTGGAATGGAATATTTGCACTCAAAGAATATTGTGCATTTTGACTTAAAATGTGATAATTTGCTTGTTAACTTAAAAGATCCTTTAAGGCCAATATGCAAGGTTGGTGATTTTGGCTTGTCAAAAATCAAACGGAACACATTGGTGTCTGGTGGTGTACGGGGGACTCTACCCTGGATGGCACCGGAGCTCCTGAACGGTAGCAGCAACAAGGTCTCAGAAAAGGTTGACGTGTTTTCATTTGGCATTGTATTATGGGAGATTCTAACGGGCGAGGAGCCATATGCAAATATGCACTATGGTGCAATTATAGGTGGAATTGTGAATAACACATTGAGGCCAACAATTCCAAGTTATTGTGATAATGAATGGAGAACACTGATGGAGCAATGTTGGGCGCCTAACCCTGCAGCTCGGCCTTCCTTCACTGAAATTGCGAGTCGGCTGCGTGTAATGTCGGCAGCAGCTAGCCAAACCAAAACACAGGGCCACAAGGCTTCTAAGTGA 3459 0.4212 MEPSGFQRTLMSNSMEPRNEFHHGSHSVTHDRMDGSNTNRRPPDLNKSEVKPVLNYSIQTGEEFALEFMRDRVNLGKPVFSNVGDSNYTTGYMELQGMLGIGHAGSGSGSDISMLSVVDKYPKEFDKINTSIYGDRSNYGSIRSIPTTSLNQDNRQFVHRYGSSRGYDSSLLMMKFLCSFGGRILPRPSDGKLRYVGGDTRILRIRKDITWQELMHKALLIYSQVQVIKYQLPGEDLDALVSVSSDEDLQNMMEECTHLQDREGTQKLRMFLFSISDLEDAQFGLGSMGDDSEVQYVVAVNGMDLGSRRNSTLIGVGFSADVVHELDGQTIERETNRVAVESEGVSNVPLTNKFDLPLNSQSSQPVLSTAPNSYETYPLFHSDQMMHHEEVRGQYGLNPAYMPVVGETPITMPTTQVVINPQGVLNDIYPPSGLQVQSPEIPTTLMANTSIQQGSDPGKAFSLETPLPAPVQLFDGYPKNNLPEASVAVNVPDGYSLPPTKKDQLQDDEVASSTSRSTFGPTYVDSHSNAVDLSCLHPPPLPKRVYYSERIPREQIELLNRSSKSDDAHGSQFNVSELLSEVNPTELLTESGENLHDGNLSNLTEYSKVVAKPLQSDGITIDNGAVKHQKQLPDASGQLKSKLSEHVKPELKQVLANSEGIIDAVNKDNVPQLESEINSKDNHNKALLGEKKGSKSDLTTLQQVPSVKQLEDPASNLPDIDWGGVSVKDSKDDSVVQGLPVSVNGNATTNGDSQHYPSNVSKEGQGEMGKVEEDNRTQHVTPLTAEEKYQNDLDGRIGTETAVPESNYDHSQLNDAESMQFDAMMENARAQESEFEDALVEARKSVLPPLDPSLGDIDMSGVQVIMNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQDGPGGTMATVTEFMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSYCDNEWRTLMEQCWAPNPAARPSFTEIASRLRVMSAAASQTKTQGHKASK* 1153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1899 1152 Coils Coil 825 845 - -
Ahy18g1899 1152 Gene3D - 192 275 - -
Ahy18g1899 1152 MobiDBLite consensus disorder prediction 744 777 - -
Ahy18g1899 1152 PANTHER SERINE-THREONINE PROTEIN KINASE 90 767 - -
Ahy18g1899 1152 PANTHER SERINE-THREONINE PROTEIN KINASE 781 1152 - -
Ahy18g1899 1152 SUPERFAMILY CAD & PB1 domains 189 277 - -
Ahy18g1899 1152 MobiDBLite consensus disorder prediction 678 692 - -
Ahy18g1899 1152 SMART PB1_new 188 275 IPR000270 GO:0005515
Ahy18g1899 1152 ProSiteProfiles Protein kinase domain profile. 870 1135 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1899 1152 Gene3D Transferase(Phosphotransferase) domain 1 958 1152 - -
Ahy18g1899 1152 MobiDBLite consensus disorder prediction 19 38 - -
Ahy18g1899 1152 MobiDBLite consensus disorder prediction 676 731 - -
Ahy18g1899 1152 MobiDBLite consensus disorder prediction 695 710 - -
Ahy18g1899 1152 MobiDBLite consensus disorder prediction 744 761 - -
Ahy18g1899 1152 ProSitePatterns Protein kinases ATP-binding region signature. 876 901 IPR017441 GO:0005524
Ahy18g1899 1152 Pfam PB1 domain 190 273 IPR000270 GO:0005515
Ahy18g1899 1152 MobiDBLite consensus disorder prediction 16 50 - -
Ahy18g1899 1152 ProSitePatterns Serine/Threonine protein kinases active-site signature. 995 1007 IPR008271 GO:0004672|GO:0006468
Ahy18g1899 1152 PRINTS Tyrosine kinase catalytic domain signature 1060 1082 IPR001245 GO:0004672|GO:0006468
Ahy18g1899 1152 PRINTS Tyrosine kinase catalytic domain signature 952 965 IPR001245 GO:0004672|GO:0006468
Ahy18g1899 1152 PRINTS Tyrosine kinase catalytic domain signature 989 1007 IPR001245 GO:0004672|GO:0006468
Ahy18g1899 1152 PRINTS Tyrosine kinase catalytic domain signature 1104 1126 IPR001245 GO:0004672|GO:0006468
Ahy18g1899 1152 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 781 1152 - -
Ahy18g1899 1152 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 90 767 - -
Ahy18g1899 1152 CDD PB1_UP2 177 273 - -
Ahy18g1899 1152 SUPERFAMILY Protein kinase-like (PK-like) 861 1132 IPR011009 -
Ahy18g1899 1152 SMART serkin_6 870 1136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1899 1152 MobiDBLite consensus disorder prediction 490 523 - -
Ahy18g1899 1152 Gene3D Phosphorylase Kinase; domain 1 863 957 - -
Ahy18g1899 1152 CDD STKc_MAP3K-like 876 1133 - -
Ahy18g1899 1152 Pfam Protein tyrosine and serine/threonine kinase 871 1133 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1899 Ahy-Chr18 93797817 93805762 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1899 3 1152 MAP Kinase Kinase Kinase AT1G16270 47.711 0.0 912
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Ahy18g1899 PK_Tyr_Ser-Thr 1.10E-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1899 - - aip:107612789 1560.04