Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1898 ATGGAACATTCAAGATTCCAAAAAGTTCTTCCAAGCAATACAATGGAACCAAGAAATGGTGAATTCCAGCCTGGGTTGCAGCCAATGATGCAGGATCGACCGGATGACATGCATACAATTAGAAGACCACCTAATGTTGGTACGGCACAAGCCAAACCTGTACTTAATTTTTCCATACAGACAGGTTATATGGATCTAAAAGGCATTTTAGGCATTAGTCATCCAACATCAGAAAGTGGATCAGACATTTCCATGCTTTCAATGGTTGACAAATATCCAAAAGAGTTTGAAAGAGTGAACACATCATTGCAGGGAGACAAAAGCAATTATGGGTCAATTCGATCAATACCAAGAACTTCAATGACTCAGGACAGTAGACAACTTGTGCAGAAGTATGGCTCTTCTCGAGGTTCCGATAGCTCATCAATGCTATTGAAGTTCCTTTGCAGCTTTGGTGGGAGAATATTACCTAGACCAAGTGATGGAAAACTAAGGTATGTTGGAGGTGATACACGTATTCTTCGTATAAGAAAGAATATATCTTGGCAGGAGCTCTTGCAGAAAGCATTATTAATGTATAGTCAGGTTCATGCAATCAAGTATCAGCTTCCGGGGGAAGATCTTGATGCTTTGGTATCTGTGTCATGTGATGAGGATTTGCAGAATATGATGGAAGAATGTAACCATCTAGAAGACAGAGAAGGATCACAAAAGCCTAGGATGTTTTTGTTCTCATTGAGTGATTTGGAGGACGCTCAATTTGGTCTCAGTGGTTTGGGTGATGATTCTGAGATCCAATATGTTGTTGCTGTTAACGGCATGGACATGGGATCAAGAAGAAACTCAACCCTGATTGGCGTGAACTTTTCAGCAAATGATCTGCATGATTTGGACAGGCAGAACACTGAAAGGGAGACTGGTAAAGTTGCTGTTGAATCTGTAGGTGTCAACAATTCTCTCCTGAATAACAAATTTGACTCATCACCAAATGTGGAATCCTTGCAACCAGTGCTACCTACTTCCTCAAATTCTTATGAAAGATATCCACAGTCCTTGCAACCAATGCACCATGGGGATCCTGTTGGTCAATATCATGTTTCTAGATCTGTTGTTGAAGACATTCCTACTACTATGCCTCCTCGTGCACTGATTAATCAAGATGGGGTTTTTAGCAAAGGCCATCCACCAGTCGGATTACCAGTACATAATTCTGAAATACCACCAGTGGTCACAAAAAAGAAGGTTGATAGTTTGATTGAACAAGCAAGCGACCAGGGTAAAGTTTTATACTTGGAAACCCCATCCTCAGCTCCTACTCAACTATTTGATGGTTACATGAAAAATAATTTTCCCGAAGCAACAGCTGTAGTTACTATGCCAGAGGGCTATCCAATACCTCCGACAAAAAAGGACCAGCTACAGAACTATGAAGATGGTGCTTCTACATCTAACAGTGGCTTTGCTCCCACTTATGTCGACTCCCAGTCAAATGCTGTTGATTTTAGTTCTCTTAACCCTCCTCCTCTTCCTGAAAGAGTTTACTATTCAGAAAGGATTCCTAGGGAGCAAGTAGATTTGCTGAATCGGTCCACCAAGTCAGATGATTTACATGGTTCTCAGTTTAACATTTCCGATTTACTTTCTGATGCAAAACCCTCAGATTCAGTTACAGGATCTGACGACAACTTGCATAATGGGAATCAGCCTCTCCGAGCTGAGGAATCGGGTGTTGCAGCAAAGCCTTTGCCTGCTGATGGCTATGCTACCAAACATCAAATATACAAACATTTTCCTGATCCAAGTAGCCAGTTGAAGTCAAAACTAACTGAGCATGTGAATTCTGAGTTGAAGAAGGTAGTACCAATAGTTGAAGGAAGTAATGATGTAGTAACTAAAGATCATGTTGTTAATTTTGAACCTGAAACTTATTGTAAAGATAATCATATCAAACACCGGCTTGATGAGATAAAAGATAGCAAATCAGAATCTGACTTTCCTACTTTGCATCAGGTTCCCTCTGCTAGGCATCTTGAGGATCCTGCTTCATGTCTTCCCGAGGTTGATTGGGGCAATGCCACTGTTACAGAATCTAATGAAAGTCGCATGGTTCAAGGACTACCTGTTTCTCTAAATGGGAACCAAACTACCAAAGATGATTTTCAACCTTCTTCAAGTGTTGCTTCAAAGACATCACAAGGTGACATTCTAATTGATATTGATGATCGATTTCCCCGTGAAGTGCTTAGTGACATGTATAAAGCTTTACTTGAAGAAGGTTTCTCGGGTCGGCATCCACTAACCTCGGATGGAGTAGGTCTAAGCATAAATGTGAAAAATCATGAACCTACACCTTGGGAATATTTTCACAAACTGGCACAAGAAGGACTCAATAATGTCTCTCTCATTGATCAGGATCATGTTAGTTTTTCACCTGCAATAGAAGAAGTGGAAGATGACGGTAGAACTCAACATGTTACGCCTCTAACAACAGGTGAAATATATCAGAAAGACTTACATGGAAGGGTTGGAACAGAAACTACTATTCTAAAGCCAAATGATCCCCTCGTGAAGGATACTGAAAGTATGCAATTTAATGCTATCATGGAAAACATAAGAGCACAGGAATCAGTTTTTGAGGATGGGAAGTTTGAAACAAGAAATCGTACACCTCCTGTTGATCCTCCCGTAAGTGAAATTGACCCGAATTCTTTGCAGGTCATAATGAATGAAGATCTTGAAGAGCTGAAGGAGCTGGGTTCTGGTACCTTTGGGACTGTGTATCATGGAAAATGGCGTGGAACAGATGTTGCCATCAAAAGAATAAAGAAAAGCTGTTTCACCGGTCGATCATCAGAGCAAGAGAGACTGACTTTAGAATTCTGGCGGGAAGCTGATATTCTTTCCAAGCTTCATCACCCAAATGTTGTGGCATTTTATGGTGTAGTTCAGGATGGACCTGGAGGAACAATGGCCACTGTTACGGAGTACATGGTGGATGGTTCTCTTCGGCATGTATTGCTTCGCAAAGATAGGTATCTAGATCGTCGCAAGAGGCTGATAATTGCTATGGATGCAGCTTTTGGAATGGAGTATTTACACTCAAAAAATATTGTTCATTTTGACTTAAAATGTGATAATTTGCTTGTGAACTTGAAAGATCCTTTACGGCCAATATGCAAGGTTGGTGATTTTGGCTTGTCAAAAATTAAGCGGAATACCTTGGTCTCAGGTGGCGTGCGGGGGACACTTCCTTGGATGGCACCGGAGCTGCTGAATGGTAGCAGCAACAAGGTGTCAGAAAAGGTTGATGTGTTCTCCTTTGGCATAGTATTGTGGGAAATTCTAACTGGTGAGGAGCCTTATGCCAATATGCACTATGGTGCAATCATAGGTGGGATTGTTAATAACACATTAAGGCCAACAATTCCCAGTTACTGCGACTCAGAATGGCGAACACTGATGGAGCAGTGCTGGGCACCAAATCCTGCAGTCAGACCTTCCTTTACAGAAATTGCCCGTCGATTGCGTGTCATGTCTGTGGCAGCTAGCCAGGCAAAGGTGCAGGGCCAAAAGGCGTCTAAATGA 3585 0.4162 MEHSRFQKVLPSNTMEPRNGEFQPGLQPMMQDRPDDMHTIRRPPNVGTAQAKPVLNFSIQTGYMDLKGILGISHPTSESGSDISMLSMVDKYPKEFERVNTSLQGDKSNYGSIRSIPRTSMTQDSRQLVQKYGSSRGSDSSSMLLKFLCSFGGRILPRPSDGKLRYVGGDTRILRIRKNISWQELLQKALLMYSQVHAIKYQLPGEDLDALVSVSCDEDLQNMMEECNHLEDREGSQKPRMFLFSLSDLEDAQFGLSGLGDDSEIQYVVAVNGMDMGSRRNSTLIGVNFSANDLHDLDRQNTERETGKVAVESVGVNNSLLNNKFDSSPNVESLQPVLPTSSNSYERYPQSLQPMHHGDPVGQYHVSRSVVEDIPTTMPPRALINQDGVFSKGHPPVGLPVHNSEIPPVVTKKKVDSLIEQASDQGKVLYLETPSSAPTQLFDGYMKNNFPEATAVVTMPEGYPIPPTKKDQLQNYEDGASTSNSGFAPTYVDSQSNAVDFSSLNPPPLPERVYYSERIPREQVDLLNRSTKSDDLHGSQFNISDLLSDAKPSDSVTGSDDNLHNGNQPLRAEESGVAAKPLPADGYATKHQIYKHFPDPSSQLKSKLTEHVNSELKKVVPIVEGSNDVVTKDHVVNFEPETYCKDNHIKHRLDEIKDSKSESDFPTLHQVPSARHLEDPASCLPEVDWGNATVTESNESRMVQGLPVSLNGNQTTKDDFQPSSSVASKTSQGDILIDIDDRFPREVLSDMYKALLEEGFSGRHPLTSDGVGLSINVKNHEPTPWEYFHKLAQEGLNNVSLIDQDHVSFSPAIEEVEDDGRTQHVTPLTTGEIYQKDLHGRVGTETTILKPNDPLVKDTESMQFNAIMENIRAQESVFEDGKFETRNRTPPVDPPVSEIDPNSLQVIMNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREADILSKLHHPNVVAFYGVVQDGPGGTMATVTEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSYCDSEWRTLMEQCWAPNPAVRPSFTEIARRLRVMSVAASQAKVQGQKASK* 1195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1898 1194 MobiDBLite consensus disorder prediction 547 569 - -
Ahy18g1898 1194 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 62 1194 - -
Ahy18g1898 1194 SMART PB1_new 159 246 IPR000270 GO:0005515
Ahy18g1898 1194 PRINTS Tyrosine kinase catalytic domain signature 994 1007 IPR001245 GO:0004672|GO:0006468
Ahy18g1898 1194 PRINTS Tyrosine kinase catalytic domain signature 1146 1168 IPR001245 GO:0004672|GO:0006468
Ahy18g1898 1194 PRINTS Tyrosine kinase catalytic domain signature 1102 1124 IPR001245 GO:0004672|GO:0006468
Ahy18g1898 1194 PRINTS Tyrosine kinase catalytic domain signature 1031 1049 IPR001245 GO:0004672|GO:0006468
Ahy18g1898 1194 Pfam PB1 domain 161 244 IPR000270 GO:0005515
Ahy18g1898 1194 CDD PB1_UP2 148 244 - -
Ahy18g1898 1194 Gene3D Phosphorylase Kinase; domain 1 905 999 - -
Ahy18g1898 1194 MobiDBLite consensus disorder prediction 474 491 - -
Ahy18g1898 1194 Pfam Protein tyrosine and serine/threonine kinase 913 1175 IPR001245 GO:0004672|GO:0006468
Ahy18g1898 1194 MobiDBLite consensus disorder prediction 547 582 - -
Ahy18g1898 1194 SUPERFAMILY CAD & PB1 domains 160 247 - -
Ahy18g1898 1194 SUPERFAMILY Protein kinase-like (PK-like) 896 1174 IPR011009 -
Ahy18g1898 1194 ProSitePatterns Protein kinases ATP-binding region signature. 918 943 IPR017441 GO:0005524
Ahy18g1898 1194 MobiDBLite consensus disorder prediction 1 23 - -
Ahy18g1898 1194 CDD STKc_MAP3K-like 918 1175 - -
Ahy18g1898 1194 ProSiteProfiles Protein kinase domain profile. 912 1177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g1898 1194 Gene3D - 163 245 - -
Ahy18g1898 1194 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1037 1049 IPR008271 GO:0004672|GO:0006468
Ahy18g1898 1194 PANTHER SERINE-THREONINE PROTEIN KINASE 62 1194 - -
Ahy18g1898 1194 MobiDBLite consensus disorder prediction 469 491 - -
Ahy18g1898 1194 Gene3D Transferase(Phosphotransferase) domain 1 1000 1194 - -
Ahy18g1898 1194 SMART serkin_6 912 1178 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1898 Ahy-Chr18 93648055 93656193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1898 7 544 MAP Kinase Kinase Kinase AT1G16270 37.500 4.10e-82 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Ahy18g1898 PK_Tyr_Ser-Thr 1.60E-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1898 - - aip:107612789 2315.81